Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 DUSP8P5-201ENST00000422884 1815 ntBASIC21.05■□□□□ 0.96
SF3B6Q9Y3B4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.05■□□□□ 0.96
SF3B6Q9Y3B4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.05■□□□□ 0.96
SF3B6Q9Y3B4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SF3B6Q9Y3B4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SF3B6Q9Y3B4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
SF3B6Q9Y3B4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SF3B6Q9Y3B4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.04■□□□□ 0.96
SF3B6Q9Y3B4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SF3B6Q9Y3B4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SF3B6Q9Y3B4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.03■□□□□ 0.96
SF3B6Q9Y3B4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.03■□□□□ 0.96
SF3B6Q9Y3B4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.02■□□□□ 0.96
SF3B6Q9Y3B4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SF3B6Q9Y3B4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SF3B6Q9Y3B4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SF3B6Q9Y3B4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SF3B6Q9Y3B4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SF3B6Q9Y3B4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.01■□□□□ 0.95
SF3B6Q9Y3B4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SF3B6Q9Y3B4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SF3B6Q9Y3B4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21■□□□□ 0.95
SF3B6Q9Y3B4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21■□□□□ 0.95
SF3B6Q9Y3B4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21■□□□□ 0.95
SF3B6Q9Y3B4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SF3B6Q9Y3B4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21■□□□□ 0.95
SF3B6Q9Y3B4 DUX4L13-201ENST00000554103 1267 ntBASIC21■□□□□ 0.95
SF3B6Q9Y3B4 DUX4L15-201ENST00000611059 1267 ntBASIC21■□□□□ 0.95
SF3B6Q9Y3B4 DUX4L23-201ENST00000615195 1269 ntBASIC21■□□□□ 0.95
SF3B6Q9Y3B4 DUX4L24-201ENST00000617576 1269 ntBASIC21■□□□□ 0.95
SF3B6Q9Y3B4 DUX4L22-201ENST00000618238 1269 ntBASIC21■□□□□ 0.95
SF3B6Q9Y3B4 DUX4L20-201ENST00000619712 1269 ntBASIC21■□□□□ 0.95
SF3B6Q9Y3B4 DUX4L21-201ENST00000622058 1269 ntBASIC21■□□□□ 0.95
SF3B6Q9Y3B4 DUX4L10-201ENST00000622460 1267 ntBASIC21■□□□□ 0.95
SF3B6Q9Y3B4 DUX4L25-201ENST00000624915 1269 ntBASIC21■□□□□ 0.95
SF3B6Q9Y3B4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SF3B6Q9Y3B4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21■□□□□ 0.95
SF3B6Q9Y3B4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SF3B6Q9Y3B4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SF3B6Q9Y3B4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SF3B6Q9Y3B4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21■□□□□ 0.95
SF3B6Q9Y3B4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21■□□□□ 0.95
SF3B6Q9Y3B4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SF3B6Q9Y3B4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21■□□□□ 0.95
SF3B6Q9Y3B4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.99■□□□□ 0.95
SF3B6Q9Y3B4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SF3B6Q9Y3B4 AC004812.2-201ENST00000611079 2094 ntBASIC20.99■□□□□ 0.95
SF3B6Q9Y3B4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SF3B6Q9Y3B4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SF3B6Q9Y3B4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SF3B6Q9Y3B4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SF3B6Q9Y3B4 AL359504.2-201ENST00000605506 1601 ntBASIC20.98■□□□□ 0.95
SF3B6Q9Y3B4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SF3B6Q9Y3B4 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.98■□□□□ 0.95
SF3B6Q9Y3B4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SF3B6Q9Y3B4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SF3B6Q9Y3B4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SF3B6Q9Y3B4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.98■□□□□ 0.95
SF3B6Q9Y3B4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SF3B6Q9Y3B4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SF3B6Q9Y3B4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.97■□□□□ 0.95
SF3B6Q9Y3B4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SF3B6Q9Y3B4 HLA-V-202ENST00000446817 847 ntBASIC20.97■□□□□ 0.95
SF3B6Q9Y3B4 MIR3648-2-201ENST00000581792 180 ntBASIC20.97■□□□□ 0.95
SF3B6Q9Y3B4 MIR3648-1-201ENST00000615959 180 ntBASIC20.97■□□□□ 0.95
SF3B6Q9Y3B4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.97■□□□□ 0.95
SF3B6Q9Y3B4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SF3B6Q9Y3B4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SF3B6Q9Y3B4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SF3B6Q9Y3B4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SF3B6Q9Y3B4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SF3B6Q9Y3B4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SF3B6Q9Y3B4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
SF3B6Q9Y3B4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SF3B6Q9Y3B4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.96■□□□□ 0.95
SF3B6Q9Y3B4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.96■□□□□ 0.95
SF3B6Q9Y3B4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SF3B6Q9Y3B4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SF3B6Q9Y3B4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SF3B6Q9Y3B4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.95■□□□□ 0.94
SF3B6Q9Y3B4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SF3B6Q9Y3B4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SF3B6Q9Y3B4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.95■□□□□ 0.94
SF3B6Q9Y3B4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SF3B6Q9Y3B4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SF3B6Q9Y3B4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SF3B6Q9Y3B4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SF3B6Q9Y3B4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SF3B6Q9Y3B4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.94■□□□□ 0.94
SF3B6Q9Y3B4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SF3B6Q9Y3B4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SF3B6Q9Y3B4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SF3B6Q9Y3B4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SF3B6Q9Y3B4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SF3B6Q9Y3B4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.93■□□□□ 0.94
SF3B6Q9Y3B4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SF3B6Q9Y3B4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SF3B6Q9Y3B4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SF3B6Q9Y3B4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SF3B6Q9Y3B4 AC016575.1-201ENST00000607026 382 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms