Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.66■■□□□ 1.06
PCNX3Q9H6A9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
PCNX3Q9H6A9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCNX3Q9H6A9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PCNX3Q9H6A9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCNX3Q9H6A9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PCNX3Q9H6A9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
PCNX3Q9H6A9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.65■■□□□ 1.06
PCNX3Q9H6A9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCNX3Q9H6A9 RPS2P7-201ENST00000447334 885 ntBASIC21.65■■□□□ 1.06
PCNX3Q9H6A9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCNX3Q9H6A9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.64■■□□□ 1.06
PCNX3Q9H6A9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
PCNX3Q9H6A9 AC139795.1-202ENST00000500444 432 ntBASIC21.64■■□□□ 1.05
PCNX3Q9H6A9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCNX3Q9H6A9 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCNX3Q9H6A9 KRT18P10-201ENST00000388836 1287 ntBASIC21.63■■□□□ 1.05
PCNX3Q9H6A9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.63■■□□□ 1.05
PCNX3Q9H6A9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCNX3Q9H6A9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCNX3Q9H6A9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.63■■□□□ 1.05
PCNX3Q9H6A9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCNX3Q9H6A9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCNX3Q9H6A9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCNX3Q9H6A9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCNX3Q9H6A9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCNX3Q9H6A9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCNX3Q9H6A9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCNX3Q9H6A9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCNX3Q9H6A9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PCNX3Q9H6A9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCNX3Q9H6A9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PCNX3Q9H6A9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCNX3Q9H6A9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.61■■□□□ 1.05
PCNX3Q9H6A9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCNX3Q9H6A9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCNX3Q9H6A9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCNX3Q9H6A9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCNX3Q9H6A9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
PCNX3Q9H6A9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.6■■□□□ 1.05
PCNX3Q9H6A9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCNX3Q9H6A9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCNX3Q9H6A9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCNX3Q9H6A9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.6■■□□□ 1.05
PCNX3Q9H6A9 AC103724.3-201ENST00000564481 992 ntBASIC21.6■■□□□ 1.05
PCNX3Q9H6A9 MIR4508-201ENST00000584178 70 ntBASIC21.6■■□□□ 1.05
PCNX3Q9H6A9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.6■■□□□ 1.05
PCNX3Q9H6A9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCNX3Q9H6A9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCNX3Q9H6A9 SLC6A10P-202ENST00000431994 2058 ntBASIC21.6■■□□□ 1.05
PCNX3Q9H6A9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCNX3Q9H6A9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.59■■□□□ 1.05
PCNX3Q9H6A9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.59■■□□□ 1.05
PCNX3Q9H6A9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PCNX3Q9H6A9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCNX3Q9H6A9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.59■■□□□ 1.05
PCNX3Q9H6A9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCNX3Q9H6A9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCNX3Q9H6A9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCNX3Q9H6A9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCNX3Q9H6A9 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCNX3Q9H6A9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.58■■□□□ 1.05
PCNX3Q9H6A9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
PCNX3Q9H6A9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
PCNX3Q9H6A9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCNX3Q9H6A9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
PCNX3Q9H6A9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.58■■□□□ 1.04
PCNX3Q9H6A9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCNX3Q9H6A9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCNX3Q9H6A9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.57■■□□□ 1.04
PCNX3Q9H6A9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCNX3Q9H6A9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.57■■□□□ 1.04
PCNX3Q9H6A9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCNX3Q9H6A9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PCNX3Q9H6A9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCNX3Q9H6A9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.56■■□□□ 1.04
PCNX3Q9H6A9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCNX3Q9H6A9 AC022211.4-201ENST00000625094 2161 ntBASIC21.56■■□□□ 1.04
PCNX3Q9H6A9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCNX3Q9H6A9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCNX3Q9H6A9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCNX3Q9H6A9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.56■■□□□ 1.04
PCNX3Q9H6A9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.56■■□□□ 1.04
PCNX3Q9H6A9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCNX3Q9H6A9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCNX3Q9H6A9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCNX3Q9H6A9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCNX3Q9H6A9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCNX3Q9H6A9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCNX3Q9H6A9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCNX3Q9H6A9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCNX3Q9H6A9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PCNX3Q9H6A9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.54■■□□□ 1.04
PCNX3Q9H6A9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCNX3Q9H6A9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCNX3Q9H6A9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.54■■□□□ 1.04
PCNX3Q9H6A9 AC010980.1-201ENST00000587192 1142 ntBASIC21.54■■□□□ 1.04
PCNX3Q9H6A9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.54■■□□□ 1.04
PCNX3Q9H6A9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCNX3Q9H6A9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms