Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRUB1Q8WWH5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB1Q8WWH5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB1Q8WWH5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB1Q8WWH5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB1Q8WWH5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB1Q8WWH5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB1Q8WWH5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB1Q8WWH5 DUX4L29-201ENST00000425409 679 ntBASIC21.65■■□□□ 1.06
TRUB1Q8WWH5 AC008813.1-201ENST00000536597 885 ntBASIC21.65■■□□□ 1.06
TRUB1Q8WWH5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.65■■□□□ 1.06
TRUB1Q8WWH5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB1Q8WWH5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
TRUB1Q8WWH5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRUB1Q8WWH5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TRUB1Q8WWH5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TRUB1Q8WWH5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRUB1Q8WWH5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRUB1Q8WWH5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRUB1Q8WWH5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
TRUB1Q8WWH5 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRUB1Q8WWH5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRUB1Q8WWH5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRUB1Q8WWH5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRUB1Q8WWH5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRUB1Q8WWH5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRUB1Q8WWH5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRUB1Q8WWH5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TRUB1Q8WWH5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRUB1Q8WWH5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRUB1Q8WWH5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRUB1Q8WWH5 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRUB1Q8WWH5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRUB1Q8WWH5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.63■■□□□ 1.05
TRUB1Q8WWH5 DUSP8P5-201ENST00000422884 1815 ntBASIC21.63■■□□□ 1.05
TRUB1Q8WWH5 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRUB1Q8WWH5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.62■■□□□ 1.05
TRUB1Q8WWH5 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRUB1Q8WWH5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRUB1Q8WWH5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRUB1Q8WWH5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRUB1Q8WWH5 AC148477.6-201ENST00000623746 465 ntBASIC21.61■■□□□ 1.05
TRUB1Q8WWH5 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.61■■□□□ 1.05
TRUB1Q8WWH5 AL359504.2-201ENST00000605506 1601 ntBASIC21.61■■□□□ 1.05
TRUB1Q8WWH5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
TRUB1Q8WWH5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRUB1Q8WWH5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.6■■□□□ 1.05
TRUB1Q8WWH5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRUB1Q8WWH5 AC141586.4-201ENST00000624558 1573 ntBASIC21.6■■□□□ 1.05
TRUB1Q8WWH5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
TRUB1Q8WWH5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRUB1Q8WWH5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRUB1Q8WWH5 MIR219A2-201ENST00000608502 1504 ntBASIC21.6■■□□□ 1.05
TRUB1Q8WWH5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRUB1Q8WWH5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
TRUB1Q8WWH5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRUB1Q8WWH5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRUB1Q8WWH5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
TRUB1Q8WWH5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
TRUB1Q8WWH5 SLC6A10P-202ENST00000431994 2058 ntBASIC21.59■■□□□ 1.05
TRUB1Q8WWH5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRUB1Q8WWH5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRUB1Q8WWH5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.58■■□□□ 1.04
TRUB1Q8WWH5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
TRUB1Q8WWH5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB1Q8WWH5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB1Q8WWH5 AL162393.1-201ENST00000437852 946 ntBASIC21.57■■□□□ 1.04
TRUB1Q8WWH5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRUB1Q8WWH5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.57■■□□□ 1.04
TRUB1Q8WWH5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
TRUB1Q8WWH5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB1Q8WWH5 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB1Q8WWH5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB1Q8WWH5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB1Q8WWH5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.56■■□□□ 1.04
TRUB1Q8WWH5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TRUB1Q8WWH5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB1Q8WWH5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB1Q8WWH5 AL359258.2-201ENST00000564063 1566 ntBASIC21.56■■□□□ 1.04
TRUB1Q8WWH5 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB1Q8WWH5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.56■■□□□ 1.04
TRUB1Q8WWH5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRUB1Q8WWH5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TRUB1Q8WWH5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRUB1Q8WWH5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRUB1Q8WWH5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TRUB1Q8WWH5 AL024507.2-201ENST00000606070 2574 ntBASIC21.55■■□□□ 1.04
TRUB1Q8WWH5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRUB1Q8WWH5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.54■■□□□ 1.04
TRUB1Q8WWH5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.54■■□□□ 1.04
TRUB1Q8WWH5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.54■■□□□ 1.04
TRUB1Q8WWH5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRUB1Q8WWH5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRUB1Q8WWH5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.54■■□□□ 1.04
TRUB1Q8WWH5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TRUB1Q8WWH5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRUB1Q8WWH5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRUB1Q8WWH5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
TRUB1Q8WWH5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRUB1Q8WWH5 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms