Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC096887.2-201ENST00000623443 1957 ntBASIC28.82■■■□□ 2.2
PDS5AQ29RF7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PDS5AQ29RF7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
PDS5AQ29RF7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
PDS5AQ29RF7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.81■■■□□ 2.2
PDS5AQ29RF7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PDS5AQ29RF7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
PDS5AQ29RF7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC28.8■■■□□ 2.2
PDS5AQ29RF7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC28.8■■■□□ 2.2
PDS5AQ29RF7 AC137630.3-201ENST00000607245 391 ntBASIC28.8■■■□□ 2.2
PDS5AQ29RF7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PDS5AQ29RF7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PDS5AQ29RF7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PDS5AQ29RF7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
PDS5AQ29RF7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PDS5AQ29RF7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.78■■■□□ 2.2
PDS5AQ29RF7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.78■■■□□ 2.2
PDS5AQ29RF7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PDS5AQ29RF7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC28.78■■■□□ 2.2
PDS5AQ29RF7 AC010501.1-201ENST00000606270 1962 ntBASIC28.78■■■□□ 2.2
PDS5AQ29RF7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
PDS5AQ29RF7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC28.78■■■□□ 2.2
PDS5AQ29RF7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.78■■■□□ 2.2
PDS5AQ29RF7 AC239859.2-201ENST00000444165 318 ntBASIC28.77■■■□□ 2.2
PDS5AQ29RF7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.77■■■□□ 2.2
PDS5AQ29RF7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC28.77■■■□□ 2.2
PDS5AQ29RF7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PDS5AQ29RF7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PDS5AQ29RF7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
PDS5AQ29RF7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
PDS5AQ29RF7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PDS5AQ29RF7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.19
PDS5AQ29RF7 ERN1-208ENST00000606895 2068 ntBASIC28.76■■■□□ 2.19
PDS5AQ29RF7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
PDS5AQ29RF7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
PDS5AQ29RF7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
PDS5AQ29RF7 BX664725.1-201ENST00000438252 379 ntBASIC28.75■■■□□ 2.19
PDS5AQ29RF7 MIR4281-201ENST00000580852 62 ntBASIC28.75■■■□□ 2.19
PDS5AQ29RF7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC28.75■■■□□ 2.19
PDS5AQ29RF7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PDS5AQ29RF7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
PDS5AQ29RF7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PDS5AQ29RF7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PDS5AQ29RF7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
PDS5AQ29RF7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PDS5AQ29RF7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC28.74■■■□□ 2.19
PDS5AQ29RF7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PDS5AQ29RF7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.74■■■□□ 2.19
PDS5AQ29RF7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PDS5AQ29RF7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC28.74■■■□□ 2.19
PDS5AQ29RF7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
PDS5AQ29RF7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
PDS5AQ29RF7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC28.73■■■□□ 2.19
PDS5AQ29RF7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.73■■■□□ 2.19
PDS5AQ29RF7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
PDS5AQ29RF7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
PDS5AQ29RF7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC28.73■■■□□ 2.19
PDS5AQ29RF7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
PDS5AQ29RF7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.73■■■□□ 2.19
PDS5AQ29RF7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PDS5AQ29RF7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PDS5AQ29RF7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.72■■■□□ 2.19
PDS5AQ29RF7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PDS5AQ29RF7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PDS5AQ29RF7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
PDS5AQ29RF7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC28.71■■■□□ 2.19
PDS5AQ29RF7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
PDS5AQ29RF7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC28.71■■■□□ 2.19
PDS5AQ29RF7 AC021242.3-201ENST00000607598 1377 ntBASIC28.71■■■□□ 2.19
PDS5AQ29RF7 FOXO3B-201ENST00000395675 1928 ntBASIC28.71■■■□□ 2.19
PDS5AQ29RF7 AC097639.1-201ENST00000565519 1891 ntBASIC28.71■■■□□ 2.19
PDS5AQ29RF7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
PDS5AQ29RF7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.71■■■□□ 2.19
PDS5AQ29RF7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC28.7■■■□□ 2.19
PDS5AQ29RF7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.7■■■□□ 2.19
PDS5AQ29RF7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
PDS5AQ29RF7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
PDS5AQ29RF7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
PDS5AQ29RF7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
PDS5AQ29RF7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC28.69■■■□□ 2.18
PDS5AQ29RF7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC28.69■■■□□ 2.18
PDS5AQ29RF7 KRT125P-201ENST00000546827 989 ntBASIC28.69■■■□□ 2.18
PDS5AQ29RF7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
PDS5AQ29RF7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PDS5AQ29RF7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PDS5AQ29RF7 AC092803.2-201ENST00000564287 1899 ntBASIC28.69■■■□□ 2.18
PDS5AQ29RF7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC28.68■■■□□ 2.18
PDS5AQ29RF7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PDS5AQ29RF7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PDS5AQ29RF7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC28.68■■■□□ 2.18
PDS5AQ29RF7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PDS5AQ29RF7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
PDS5AQ29RF7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC28.68■■■□□ 2.18
PDS5AQ29RF7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PDS5AQ29RF7 MIR4787-201ENST00000607364 84 ntBASIC28.68■■■□□ 2.18
PDS5AQ29RF7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
PDS5AQ29RF7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PDS5AQ29RF7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
PDS5AQ29RF7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PDS5AQ29RF7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms