Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 RPN7YPR108W 1290 nt5.93□□□□□ -1.46
DDC1Q08949 XBP1YIL101C 1944 nt5.92□□□□□ -1.46
DDC1Q08949 YDR154CYDR154C 351 nt5.92□□□□□ -1.46
DDC1Q08949 ATO3YDR384C 828 nt5.92□□□□□ -1.46
DDC1Q08949 NPA3YJR072C 1158 nt5.92□□□□□ -1.46
DDC1Q08949 ARR3YPR201W 1215 nt5.92□□□□□ -1.46
DDC1Q08949 RSC30YHR056C 2652 nt5.92□□□□□ -1.46
DDC1Q08949 IME2YJL106W 1938 nt5.91□□□□□ -1.46
DDC1Q08949 ISC1YER019W 1434 nt5.91□□□□□ -1.46
DDC1Q08949 BRL1YHR036W 1416 nt5.91□□□□□ -1.46
DDC1Q08949 ICT1YLR099C 1185 nt5.91□□□□□ -1.46
DDC1Q08949 DCN1YLR128W 810 nt5.91□□□□□ -1.46
DDC1Q08949 STM1YLR150W 822 nt5.91□□□□□ -1.46
DDC1Q08949 CWC27YPL064C 906 nt5.91□□□□□ -1.46
DDC1Q08949 DIA3YDL024C 1407 nt5.91□□□□□ -1.46
DDC1Q08949 SHM1YBR263W 1473 nt5.9□□□□□ -1.46
DDC1Q08949 EFM4YIL064W 774 nt5.9□□□□□ -1.46
DDC1Q08949 QNS1YHR074W 2145 nt5.9□□□□□ -1.47
DDC1Q08949 PRP46YPL151C 1356 nt5.9□□□□□ -1.47
DDC1Q08949 KNS1YLL019C 2214 nt5.9□□□□□ -1.47
DDC1Q08949 ERC1YHR032W 1746 nt5.89□□□□□ -1.47
DDC1Q08949 IMA2YOL157C 1770 nt5.89□□□□□ -1.47
DDC1Q08949 RPS2YGL123W 765 nt5.89□□□□□ -1.47
DDC1Q08949 SAC6YDR129C 1929 nt5.89□□□□□ -1.47
DDC1Q08949 ADY2YCR010C 852 nt5.88□□□□□ -1.47
DDC1Q08949 TRP5YGL026C 2124 nt5.88□□□□□ -1.47
DDC1Q08949 FAF1YIL019W 1041 nt5.88□□□□□ -1.47
DDC1Q08949 TAL1YLR354C 1008 nt5.88□□□□□ -1.47
DDC1Q08949 SCO2YBR024W 906 nt5.88□□□□□ -1.47
DDC1Q08949 CSG2YBR036C 1233 nt5.88□□□□□ -1.47
DDC1Q08949 MRPL36YBR122C 534 nt5.88□□□□□ -1.47
DDC1Q08949 YBR124WYBR124W 360 nt5.88□□□□□ -1.47
DDC1Q08949 SKN1YGR143W 2316 nt5.88□□□□□ -1.47
DDC1Q08949 PKC1YBL105C 3456 nt5.88□□□□□ -1.47
DDC1Q08949 IRS4YKR019C 1848 nt5.88□□□□□ -1.47
DDC1Q08949 PYC1YGL062W 3537 nt5.87□□□□□ -1.47
DDC1Q08949 YER148W-AYER148W-A 579 nt5.87□□□□□ -1.47
DDC1Q08949 YER186CYER186C 921 nt5.87□□□□□ -1.47
DDC1Q08949 KSS1YGR040W 1107 nt5.87□□□□□ -1.47
DDC1Q08949 YRF1-4YLR466W 4149 nt5.87□□□□□ -1.47
DDC1Q08949 GAT1YFL021W 1533 nt5.87□□□□□ -1.47
DDC1Q08949 HSP78YDR258C 2436 nt5.86□□□□□ -1.47
DDC1Q08949 YER010CYER010C 705 nt5.86□□□□□ -1.47
DDC1Q08949 MLC2YPR188C 492 nt5.86□□□□□ -1.47
DDC1Q08949 KTR5YNL029C 1569 nt5.85□□□□□ -1.47
DDC1Q08949 COG1YGL223C 1254 nt5.85□□□□□ -1.47
DDC1Q08949 VMA4YOR332W 702 nt5.85□□□□□ -1.47
DDC1Q08949 IMA5YJL216C 1746 nt5.85□□□□□ -1.47
DDC1Q08949 CIS3YJL158C 684 nt5.84□□□□□ -1.47
DDC1Q08949 TKL1YPR074C 2043 nt5.84□□□□□ -1.48
DDC1Q08949 CIT3YPR001W 1461 nt5.83□□□□□ -1.48
DDC1Q08949 YME1YPR024W 2244 nt5.83□□□□□ -1.48
DDC1Q08949 TEL2YGR099W 2067 nt5.83□□□□□ -1.48
DDC1Q08949 SYN8YAL014C 768 nt5.83□□□□□ -1.48
DDC1Q08949 ELA1YNL230C 1140 nt5.83□□□□□ -1.48
DDC1Q08949 ARG1YOL058W 1263 nt5.83□□□□□ -1.48
DDC1Q08949 MRP51YPL118W 1035 nt5.83□□□□□ -1.48
DDC1Q08949 RIO1YOR119C 1455 nt5.83□□□□□ -1.48
DDC1Q08949 MAK32YCR019W 1092 nt5.82□□□□□ -1.48
DDC1Q08949 VPS4YPR173C 1314 nt5.81□□□□□ -1.48
DDC1Q08949 VNX1YNL321W 2727 nt5.81□□□□□ -1.48
DDC1Q08949 COX9YDL067C 180 nt5.81□□□□□ -1.48
DDC1Q08949 GEP5YLR091W 882 nt5.81□□□□□ -1.48
DDC1Q08949 RSA4YCR072C 1548 nt5.8□□□□□ -1.48
DDC1Q08949 BUL1YMR275C 2931 nt5.8□□□□□ -1.48
DDC1Q08949 RAP1YNL216W 2484 nt5.8□□□□□ -1.48
DDC1Q08949 YPL277CYPL277C 1464 nt5.8□□□□□ -1.48
DDC1Q08949 YLR194CYLR194C 765 nt5.8□□□□□ -1.48
DDC1Q08949 PAT1YCR077C 2391 nt5.79□□□□□ -1.48
DDC1Q08949 YGR176WYGR176W 348 nt5.79□□□□□ -1.48
DDC1Q08949 YML6YML025C 861 nt5.79□□□□□ -1.48
DDC1Q08949 DAL82YNL314W 768 nt5.79□□□□□ -1.48
DDC1Q08949 LSG1YGL099W 1923 nt5.79□□□□□ -1.48
DDC1Q08949 YCR097W-AYCR097W-A 267 nt5.78□□□□□ -1.48
DDC1Q08949 GIR2YDR152W 798 nt5.78□□□□□ -1.48
DDC1Q08949 RMA1YKL132C 1293 nt5.78□□□□□ -1.48
DDC1Q08949 YBR230W-AYBR230W-A 201 nt5.78□□□□□ -1.48
DDC1Q08949 EMW1YNL313C 2715 nt5.78□□□□□ -1.48
DDC1Q08949 HIR1YBL008W 2523 nt5.78□□□□□ -1.48
DDC1Q08949 YAP1801YHR161C 1914 nt5.78□□□□□ -1.48
DDC1Q08949 YDR514CYDR514C 1452 nt5.77□□□□□ -1.49
DDC1Q08949 ASN1YPR145W 1719 nt5.77□□□□□ -1.49
DDC1Q08949 FAT3YKL187C 2253 nt5.77□□□□□ -1.49
DDC1Q08949 SHO1YER118C 1104 nt5.77□□□□□ -1.49
DDC1Q08949 tN(GUU)CtN(GUU)C 74 nt5.77□□□□□ -1.49
DDC1Q08949 tN(GUU)FtN(GUU)F 74 nt5.77□□□□□ -1.49
DDC1Q08949 tN(GUU)GtN(GUU)G 74 nt5.77□□□□□ -1.49
DDC1Q08949 tN(GUU)KtN(GUU)K 74 nt5.77□□□□□ -1.49
DDC1Q08949 tN(GUU)LtN(GUU)L 74 nt5.77□□□□□ -1.49
DDC1Q08949 tN(GUU)N1tN(GUU)N1 74 nt5.77□□□□□ -1.49
DDC1Q08949 tN(GUU)N2tN(GUU)N2 74 nt5.77□□□□□ -1.49
DDC1Q08949 tN(GUU)O1tN(GUU)O1 74 nt5.77□□□□□ -1.49
DDC1Q08949 tN(GUU)O2tN(GUU)O2 74 nt5.77□□□□□ -1.49
DDC1Q08949 tN(GUU)PtN(GUU)P 74 nt5.77□□□□□ -1.49
DDC1Q08949 HSX1tR(CCU)J 72 nt5.77□□□□□ -1.49
DDC1Q08949 PGU1YJR153W 1086 nt5.77□□□□□ -1.49
DDC1Q08949 HCR1YLR192C 798 nt5.77□□□□□ -1.49
DDC1Q08949 PIN2YOR104W 849 nt5.77□□□□□ -1.49
DDC1Q08949 SMF2YHR050W 1650 nt5.77□□□□□ -1.49
DDC1Q08949 YEH1YLL012W 1722 nt5.77□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 20.1 ms