Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RPP38P78345 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.31■■□□□ 1.16
RPP38P78345 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPP38P78345 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RPP38P78345 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
RPP38P78345 AC012354.3-201ENST00000623734 483 ntBASIC22.3■■□□□ 1.16
RPP38P78345 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RPP38P78345 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
RPP38P78345 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPP38P78345 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RPP38P78345 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RPP38P78345 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RPP38P78345 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
RPP38P78345 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RPP38P78345 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RPP38P78345 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.29■■□□□ 1.16
RPP38P78345 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RPP38P78345 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RPP38P78345 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.29■■□□□ 1.16
RPP38P78345 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RPP38P78345 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RPP38P78345 AC022211.4-201ENST00000625094 2161 ntBASIC22.28■■□□□ 1.16
RPP38P78345 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RPP38P78345 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RPP38P78345 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RPP38P78345 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RPP38P78345 AC138932.3-201ENST00000567634 1902 ntBASIC22.27■■□□□ 1.16
RPP38P78345 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPP38P78345 KRT18P60-201ENST00000312876 1297 ntBASIC22.27■■□□□ 1.16
RPP38P78345 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPP38P78345 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPP38P78345 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.27■■□□□ 1.16
RPP38P78345 AL139125.2-201ENST00000623134 1869 ntBASIC22.27■■□□□ 1.16
RPP38P78345 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPP38P78345 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPP38P78345 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPP38P78345 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RPP38P78345 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPP38P78345 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPP38P78345 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.26■■□□□ 1.15
RPP38P78345 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPP38P78345 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
RPP38P78345 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPP38P78345 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.25■■□□□ 1.15
RPP38P78345 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPP38P78345 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPP38P78345 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RPP38P78345 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPP38P78345 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RPP38P78345 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RPP38P78345 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPP38P78345 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPP38P78345 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
RPP38P78345 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
RPP38P78345 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.25■■□□□ 1.15
RPP38P78345 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.24■■□□□ 1.15
RPP38P78345 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPP38P78345 AC018755.3-202ENST00000596210 929 ntBASIC22.24■■□□□ 1.15
RPP38P78345 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RPP38P78345 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
RPP38P78345 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.24■■□□□ 1.15
RPP38P78345 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPP38P78345 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPP38P78345 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPP38P78345 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPP38P78345 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RPP38P78345 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
RPP38P78345 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
RPP38P78345 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RPP38P78345 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.23■■□□□ 1.15
RPP38P78345 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RPP38P78345 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RPP38P78345 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.23■■□□□ 1.15
RPP38P78345 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.23■■□□□ 1.15
RPP38P78345 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RPP38P78345 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RPP38P78345 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RPP38P78345 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RPP38P78345 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RPP38P78345 KRT18P10-201ENST00000388836 1287 ntBASIC22.22■■□□□ 1.15
RPP38P78345 AC129492.7-201ENST00000622992 756 ntBASIC22.22■■□□□ 1.15
RPP38P78345 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RPP38P78345 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.21■■□□□ 1.15
RPP38P78345 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RPP38P78345 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.21■■□□□ 1.15
RPP38P78345 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.21■■□□□ 1.15
RPP38P78345 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPP38P78345 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.21■■□□□ 1.15
RPP38P78345 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
RPP38P78345 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPP38P78345 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.2■■□□□ 1.15
RPP38P78345 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
RPP38P78345 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
RPP38P78345 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RPP38P78345 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RPP38P78345 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RPP38P78345 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.2■■□□□ 1.14
RPP38P78345 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RPP38P78345 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RPP38P78345 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms