Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 CKA2YOR061W 1020 nt4.95□□□□□ -1.62
CDC40P40968 KTR1YOR099W 1182 nt4.95□□□□□ -1.62
CDC40P40968 HIR1YBL008W 2523 nt4.95□□□□□ -1.62
CDC40P40968 STE12YHR084W 2067 nt4.95□□□□□ -1.62
CDC40P40968 GUD1YDL238C 1470 nt4.94□□□□□ -1.62
CDC40P40968 BUD14YAR014C 2130 nt4.94□□□□□ -1.62
CDC40P40968 RSM10YDR041W 612 nt4.94□□□□□ -1.62
CDC40P40968 YGL102CYGL102C 429 nt4.94□□□□□ -1.62
CDC40P40968 CYS3YAL012W 1185 nt4.94□□□□□ -1.62
CDC40P40968 YLR162WYLR162W 357 nt4.94□□□□□ -1.62
CDC40P40968 YLR296WYLR296W 327 nt4.94□□□□□ -1.62
CDC40P40968 RFA2YNL312W 822 nt4.94□□□□□ -1.62
CDC40P40968 DAP1YPL170W 459 nt4.94□□□□□ -1.62
CDC40P40968 CLA4YNL298W 2529 nt4.94□□□□□ -1.62
CDC40P40968 UBA1YKL210W 3075 nt4.94□□□□□ -1.62
CDC40P40968 KCH1YJR054W 1494 nt4.94□□□□□ -1.62
CDC40P40968 NTH2YBR001C 2343 nt4.94□□□□□ -1.62
CDC40P40968 GIP1YBR045C 1920 nt4.93□□□□□ -1.62
CDC40P40968 SNF3YDL194W 2655 nt4.93□□□□□ -1.62
CDC40P40968 YLL067CYLL067C 3618 nt4.93□□□□□ -1.62
CDC40P40968 LCB3YJL134W 1230 nt4.93□□□□□ -1.62
CDC40P40968 MID2YLR332W 1131 nt4.93□□□□□ -1.62
CDC40P40968 YPL257WYPL257W 582 nt4.93□□□□□ -1.62
CDC40P40968 snR32snR32 188 nt4.93□□□□□ -1.62
CDC40P40968 DFG5YMR238W 1377 nt4.92□□□□□ -1.62
CDC40P40968 ROG3YFR022W 2202 nt4.92□□□□□ -1.62
CDC40P40968 RPT1YKL145W 1404 nt4.92□□□□□ -1.62
CDC40P40968 VMA3YEL027W 483 nt4.92□□□□□ -1.62
CDC40P40968 TMT1YER175C 900 nt4.92□□□□□ -1.62
CDC40P40968 NPA3YJR072C 1158 nt4.92□□□□□ -1.62
CDC40P40968 SML1YML058W 315 nt4.92□□□□□ -1.62
CDC40P40968 MTF1YMR228W 1026 nt4.92□□□□□ -1.62
CDC40P40968 POR1YNL055C 852 nt4.92□□□□□ -1.62
CDC40P40968 MCP1YOR228C 909 nt4.92□□□□□ -1.62
CDC40P40968 ELC1YPL046C 300 nt4.92□□□□□ -1.62
CDC40P40968 YEF1YEL041W 1488 nt4.92□□□□□ -1.62
CDC40P40968 COX15YER141W 1461 nt4.92□□□□□ -1.62
CDC40P40968 COX10YPL172C 1389 nt4.91□□□□□ -1.62
CDC40P40968 GUA1YMR217W 1578 nt4.91□□□□□ -1.62
CDC40P40968 GCR2YNL199C 1605 nt4.91□□□□□ -1.62
CDC40P40968 YPK2YMR104C 2034 nt4.91□□□□□ -1.62
CDC40P40968 EAF5YEL018W 840 nt4.91□□□□□ -1.62
CDC40P40968 YLL056CYLL056C 897 nt4.91□□□□□ -1.62
CDC40P40968 MRPL19YNL185C 477 nt4.91□□□□□ -1.62
CDC40P40968 YOL131WYOL131W 327 nt4.91□□□□□ -1.62
CDC40P40968 TBF1YPL128C 1689 nt4.91□□□□□ -1.62
CDC40P40968 YAP1801YHR161C 1914 nt4.91□□□□□ -1.62
CDC40P40968 TEP1YNL128W 1305 nt4.91□□□□□ -1.62
CDC40P40968 AFT1YGL071W 2073 nt4.9□□□□□ -1.62
CDC40P40968 MEC3YLR288C 1425 nt4.9□□□□□ -1.62
CDC40P40968 LCB2YDR062W 1686 nt4.9□□□□□ -1.62
CDC40P40968 TRP3YKL211C 1455 nt4.9□□□□□ -1.62
CDC40P40968 YGL235WYGL235W 537 nt4.9□□□□□ -1.63
CDC40P40968 MED4YOR174W 855 nt4.9□□□□□ -1.63
CDC40P40968 LDB16YCL005W 771 nt4.9□□□□□ -1.63
CDC40P40968 ICP55YER078C 1536 nt4.9□□□□□ -1.63
CDC40P40968 FRE7YOL152W 1863 nt4.9□□□□□ -1.63
CDC40P40968 ACS2YLR153C 2052 nt4.89□□□□□ -1.63
CDC40P40968 CHO1YER026C 831 nt4.89□□□□□ -1.63
CDC40P40968 SWD1YAR003W 1281 nt4.89□□□□□ -1.63
CDC40P40968 RPL10YLR075W 666 nt4.89□□□□□ -1.63
CDC40P40968 YNL194CYNL194C 906 nt4.89□□□□□ -1.63
CDC40P40968 FIT2YOR382W 462 nt4.89□□□□□ -1.63
CDC40P40968 APL6YGR261C 2430 nt4.89□□□□□ -1.63
CDC40P40968 YJL163CYJL163C 1668 nt4.89□□□□□ -1.63
CDC40P40968 ERC1YHR032W 1746 nt4.89□□□□□ -1.63
CDC40P40968 GLE1YDL207W 1617 nt4.88□□□□□ -1.63
CDC40P40968 MDE1YJR024C 735 nt4.88□□□□□ -1.63
CDC40P40968 LGE1YPL055C 999 nt4.88□□□□□ -1.63
CDC40P40968 MRL1YPR079W 1146 nt4.88□□□□□ -1.63
CDC40P40968 VTC2YFL004W 2487 nt4.88□□□□□ -1.63
CDC40P40968 YTP1YNL237W 1380 nt4.88□□□□□ -1.63
CDC40P40968 GAT1YFL021W 1533 nt4.87□□□□□ -1.63
CDC40P40968 YIL067CYIL067C 2037 nt4.87□□□□□ -1.63
CDC40P40968 MBP1YDL056W 2502 nt4.87□□□□□ -1.63
CDC40P40968 FAA4YMR246W 2085 nt4.87□□□□□ -1.63
CDC40P40968 YME1YPR024W 2244 nt4.87□□□□□ -1.63
CDC40P40968 HST4YDR191W 1113 nt4.87□□□□□ -1.63
CDC40P40968 RTT103YDR289C 1230 nt4.87□□□□□ -1.63
CDC40P40968 YHR070C-AYHR070C-A 411 nt4.87□□□□□ -1.63
CDC40P40968 AIM46YHR199C 933 nt4.87□□□□□ -1.63
CDC40P40968 POP5YAL033W 522 nt4.87□□□□□ -1.63
CDC40P40968 GLN1YPR035W 1113 nt4.87□□□□□ -1.63
CDC40P40968 YPR076WYPR076W 375 nt4.87□□□□□ -1.63
CDC40P40968 NUP49YGL172W 1419 nt4.87□□□□□ -1.63
CDC40P40968 OXP1YKL215C 3861 nt4.86□□□□□ -1.63
CDC40P40968 YJL193WYJL193W 1209 nt4.86□□□□□ -1.63
CDC40P40968 IFA38YBR159W 1044 nt4.86□□□□□ -1.63
CDC40P40968 CLB4YLR210W 1383 nt4.86□□□□□ -1.63
CDC40P40968 RET1YOR207C 3450 nt4.86□□□□□ -1.63
CDC40P40968 MAL11YGR289C 1851 nt4.86□□□□□ -1.63
CDC40P40968 YDL085C-AYDL085C-A 207 nt4.85□□□□□ -1.63
CDC40P40968 FAL1YDR021W 1200 nt4.85□□□□□ -1.63
CDC40P40968 LYS1YIR034C 1122 nt4.85□□□□□ -1.63
CDC40P40968 YOL046CYOL046C 675 nt4.85□□□□□ -1.63
CDC40P40968 YJR124CYJR124C 1347 nt4.85□□□□□ -1.63
CDC40P40968 PSE1YMR308C 3270 nt4.85□□□□□ -1.63
CDC40P40968 MRE11YMR224C 2079 nt4.84□□□□□ -1.63
CDC40P40968 ATR1YML116W 1629 nt4.84□□□□□ -1.63
CDC40P40968 ATP1YBL099W 1638 nt4.84□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 242.5 ms