Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 SIT4YDL047W 936 nt5.9□□□□□ -1.46
LSM5P40089 YDR278CYDR278C 318 nt5.9□□□□□ -1.46
LSM5P40089 RPR2YIR015W 435 nt5.9□□□□□ -1.46
LSM5P40089 MPM1YJL066C 759 nt5.9□□□□□ -1.46
LSM5P40089 SEN34YAR008W 828 nt5.9□□□□□ -1.46
LSM5P40089 DUS4YLR405W 1104 nt5.9□□□□□ -1.46
LSM5P40089 YHM2YMR241W 945 nt5.9□□□□□ -1.46
LSM5P40089 RBA50YDR527W 1320 nt5.9□□□□□ -1.47
LSM5P40089 CDS1YBR029C 1374 nt5.9□□□□□ -1.47
LSM5P40089 SRV2YNL138W 1581 nt5.89□□□□□ -1.47
LSM5P40089 PPM1YDR435C 987 nt5.89□□□□□ -1.47
LSM5P40089 YNL042W-BYNL042W-B 258 nt5.89□□□□□ -1.47
LSM5P40089 NPT1YOR209C 1290 nt5.89□□□□□ -1.47
LSM5P40089 MOD5YOR274W 1287 nt5.89□□□□□ -1.47
LSM5P40089 DAP1YPL170W 459 nt5.89□□□□□ -1.47
LSM5P40089 ENV7YPL236C 1095 nt5.89□□□□□ -1.47
LSM5P40089 VPS61YDR136C 573 nt5.88□□□□□ -1.47
LSM5P40089 LEU5YHR002W 1074 nt5.88□□□□□ -1.47
LSM5P40089 COA1YIL157C 594 nt5.88□□□□□ -1.47
LSM5P40089 ECM19YLR390W 339 nt5.88□□□□□ -1.47
LSM5P40089 YPR114WYPR114W 948 nt5.88□□□□□ -1.47
LSM5P40089 CCZ1YBR131W 2115 nt5.87□□□□□ -1.47
LSM5P40089 YBR284WYBR284W 2394 nt5.87□□□□□ -1.47
LSM5P40089 NSI1YDR026C 1713 nt5.86□□□□□ -1.47
LSM5P40089 GLE1YDL207W 1617 nt5.86□□□□□ -1.47
LSM5P40089 GUD1YDL238C 1470 nt5.86□□□□□ -1.47
LSM5P40089 HXK2YGL253W 1461 nt5.86□□□□□ -1.47
LSM5P40089 ADE12YNL220W 1302 nt5.86□□□□□ -1.47
LSM5P40089 YLR122CYLR122C 378 nt5.86□□□□□ -1.47
LSM5P40089 SCP1YOR367W 603 nt5.86□□□□□ -1.47
LSM5P40089 NHA1YLR138W 2958 nt5.86□□□□□ -1.47
LSM5P40089 UTP4YDR324C 2331 nt5.86□□□□□ -1.47
LSM5P40089 FAT3YKL187C 2253 nt5.86□□□□□ -1.47
LSM5P40089 MNS1YJR131W 1650 nt5.85□□□□□ -1.47
LSM5P40089 PRI2YKL045W 1587 nt5.85□□□□□ -1.47
LSM5P40089 YEF1YEL041W 1488 nt5.85□□□□□ -1.47
LSM5P40089 GPA2YER020W 1350 nt5.85□□□□□ -1.47
LSM5P40089 SUB2YDL084W 1341 nt5.85□□□□□ -1.47
LSM5P40089 COX9YDL067C 180 nt5.85□□□□□ -1.47
LSM5P40089 YGL235WYGL235W 537 nt5.85□□□□□ -1.47
LSM5P40089 tR(ACG)DtR(ACG)D 73 nt5.85□□□□□ -1.47
LSM5P40089 tR(ACG)EtR(ACG)E 73 nt5.85□□□□□ -1.47
LSM5P40089 tR(ACG)KtR(ACG)K 73 nt5.85□□□□□ -1.47
LSM5P40089 tR(ACG)LtR(ACG)L 73 nt5.85□□□□□ -1.47
LSM5P40089 tR(ACG)OtR(ACG)O 73 nt5.85□□□□□ -1.47
LSM5P40089 YMR119W-AYMR119W-A 375 nt5.85□□□□□ -1.47
LSM5P40089 TEL2YGR099W 2067 nt5.84□□□□□ -1.47
LSM5P40089 RAD24YER173W 1980 nt5.84□□□□□ -1.47
LSM5P40089 SPC97YHR172W 2472 nt5.84□□□□□ -1.47
LSM5P40089 TAH18YPR048W 1872 nt5.84□□□□□ -1.47
LSM5P40089 GPI11YDR302W 660 nt5.84□□□□□ -1.47
LSM5P40089 PRS2YER099C 957 nt5.84□□□□□ -1.47
LSM5P40089 YIR042CYIR042C 711 nt5.84□□□□□ -1.47
LSM5P40089 YML6YML025C 861 nt5.84□□□□□ -1.47
LSM5P40089 MRPS5YBR251W 924 nt5.84□□□□□ -1.47
LSM5P40089 ALT2YDR111C 1524 nt5.84□□□□□ -1.48
LSM5P40089 MRPL1YDR116C 858 nt5.83□□□□□ -1.48
LSM5P40089 UPS3YDR185C 540 nt5.83□□□□□ -1.48
LSM5P40089 YDR396WYDR396W 501 nt5.83□□□□□ -1.48
LSM5P40089 BCY1YIL033C 1251 nt5.83□□□□□ -1.48
LSM5P40089 YLR126CYLR126C 756 nt5.83□□□□□ -1.48
LSM5P40089 SNN1YNL086W 309 nt5.83□□□□□ -1.48
LSM5P40089 MED4YOR174W 855 nt5.83□□□□□ -1.48
LSM5P40089 YOR200WYOR200W 399 nt5.83□□□□□ -1.48
LSM5P40089 COX20YDR231C 618 nt5.82□□□□□ -1.48
LSM5P40089 APN1YKL114C 1104 nt5.82□□□□□ -1.48
LSM5P40089 KKQ8YKL168C 2175 nt5.82□□□□□ -1.48
LSM5P40089 ATG1YGL180W 2694 nt5.81□□□□□ -1.48
LSM5P40089 PMA1YGL008C 2757 nt5.81□□□□□ -1.48
LSM5P40089 HST3YOR025W 1344 nt5.81□□□□□ -1.48
LSM5P40089 YHR095WYHR095W 495 nt5.81□□□□□ -1.48
LSM5P40089 ERG7YHR072W 2196 nt5.8□□□□□ -1.48
LSM5P40089 PYK2YOR347C 1521 nt5.8□□□□□ -1.48
LSM5P40089 DFM1YDR411C 1026 nt5.8□□□□□ -1.48
LSM5P40089 YJL171CYJL171C 1191 nt5.8□□□□□ -1.48
LSM5P40089 OAC1YKL120W 975 nt5.8□□□□□ -1.48
LSM5P40089 SHP1YBL058W 1272 nt5.8□□□□□ -1.48
LSM5P40089 CYC8YBR112C 2901 nt5.79□□□□□ -1.48
LSM5P40089 YEL020CYEL020C 1683 nt5.79□□□□□ -1.48
LSM5P40089 YDR514CYDR514C 1452 nt5.79□□□□□ -1.48
LSM5P40089 IPK1YDR315C 846 nt5.79□□□□□ -1.48
LSM5P40089 ASK1YKL052C 879 nt5.79□□□□□ -1.48
LSM5P40089 HAP3YBL021C 435 nt5.79□□□□□ -1.48
LSM5P40089 CIN4YMR138W 576 nt5.79□□□□□ -1.48
LSM5P40089 YPL102CYPL102C 303 nt5.79□□□□□ -1.48
LSM5P40089 PMT2YAL023C 2280 nt5.79□□□□□ -1.48
LSM5P40089 AAP1YHR047C 2571 nt5.79□□□□□ -1.48
LSM5P40089 ISN1YOR155C 1353 nt5.79□□□□□ -1.48
LSM5P40089 TUL1YKL034W 2277 nt5.78□□□□□ -1.48
LSM5P40089 ATG4YNL223W 1485 nt5.78□□□□□ -1.48
LSM5P40089 UBX2YML013W 1755 nt5.78□□□□□ -1.48
LSM5P40089 HMLALPHA1YCL066W 528 nt5.78□□□□□ -1.48
LSM5P40089 MATALPHA1YCR040W 528 nt5.78□□□□□ -1.48
LSM5P40089 UGX2YDL169C 672 nt5.78□□□□□ -1.48
LSM5P40089 RTT103YDR289C 1230 nt5.78□□□□□ -1.48
LSM5P40089 YML012C-AYML012C-A 378 nt5.78□□□□□ -1.48
LSM5P40089 YDL022C-AYDL022C-A 249 nt5.77□□□□□ -1.49
LSM5P40089 RPT3YDR394W 1287 nt5.77□□□□□ -1.49
LSM5P40089 SPO7YAL009W 780 nt5.77□□□□□ -1.49
LSM5P40089 MRPS12YNR036C 462 nt5.77□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms