Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAF1P04049 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAF1P04049 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RAF1P04049 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.34■■□□□ 1.01
RAF1P04049 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAF1P04049 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
RAF1P04049 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAF1P04049 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
RAF1P04049 KRT8P33-201ENST00000508125 1423 ntBASIC21.33■■□□□ 1.01
RAF1P04049 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RAF1P04049 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAF1P04049 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.33■■□□□ 1.01
RAF1P04049 AC139795.1-202ENST00000500444 432 ntBASIC21.33■■□□□ 1.01
RAF1P04049 AC010980.1-201ENST00000587192 1142 ntBASIC21.33■■□□□ 1.01
RAF1P04049 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.33■■□□□ 1.01
RAF1P04049 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
RAF1P04049 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.33■■□□□ 1
RAF1P04049 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RAF1P04049 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.32■■□□□ 1
RAF1P04049 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.32■■□□□ 1
RAF1P04049 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAF1P04049 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.32■■□□□ 1
RAF1P04049 YBX1P4-201ENST00000392794 808 ntBASIC21.32■■□□□ 1
RAF1P04049 AC025884.2-201ENST00000553429 711 ntBASIC21.32■■□□□ 1
RAF1P04049 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.32■■□□□ 1
RAF1P04049 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAF1P04049 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.31■■□□□ 1
RAF1P04049 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RAF1P04049 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RAF1P04049 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAF1P04049 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RAF1P04049 AC093536.1-201ENST00000569153 554 ntBASIC21.31■■□□□ 1
RAF1P04049 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAF1P04049 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.31■■□□□ 1
RAF1P04049 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.31■■□□□ 1
RAF1P04049 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.3■■□□□ 1
RAF1P04049 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.3■■□□□ 1
RAF1P04049 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.3■■□□□ 1
RAF1P04049 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAF1P04049 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
RAF1P04049 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAF1P04049 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.3■■□□□ 1
RAF1P04049 AC009299.2-201ENST00000482477 511 ntBASIC21.3■■□□□ 1
RAF1P04049 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAF1P04049 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RAF1P04049 AC019069.1-201ENST00000610008 1333 ntBASIC21.29■■□□□ 1
RAF1P04049 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RAF1P04049 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.29■■□□□ 1
RAF1P04049 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAF1P04049 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAF1P04049 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAF1P04049 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAF1P04049 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
RAF1P04049 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.29■■□□□ 1
RAF1P04049 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.29■■□□□ 1
RAF1P04049 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.29■■□□□ 1
RAF1P04049 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAF1P04049 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.29■■□□□ 1
RAF1P04049 ERN1-208ENST00000606895 2068 ntBASIC21.28■■□□□ 1
RAF1P04049 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAF1P04049 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAF1P04049 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAF1P04049 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.28■■□□□ 1
RAF1P04049 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.28■■□□□ 1
RAF1P04049 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RAF1P04049 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAF1P04049 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RAF1P04049 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RAF1P04049 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.27■■□□□ 1
RAF1P04049 RAP2CP1-202ENST00000605179 643 ntBASIC21.27■■□□□ 1
RAF1P04049 MIR6765-201ENST00000614092 87 ntBASIC21.27■■□□□ 1
RAF1P04049 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
RAF1P04049 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAF1P04049 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAF1P04049 AC142381.3-201ENST00000568208 1670 ntBASIC21.26■□□□□ 0.99
RAF1P04049 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.26■□□□□ 0.99
RAF1P04049 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAF1P04049 AC131212.1-201ENST00000613771 668 ntBASIC21.26■□□□□ 0.99
RAF1P04049 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.26■□□□□ 0.99
RAF1P04049 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAF1P04049 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RAF1P04049 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
RAF1P04049 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAF1P04049 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAF1P04049 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAF1P04049 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.25■□□□□ 0.99
RAF1P04049 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.25■□□□□ 0.99
RAF1P04049 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAF1P04049 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAF1P04049 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RAF1P04049 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAF1P04049 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAF1P04049 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.24■□□□□ 0.99
RAF1P04049 SPCS2P3-201ENST00000500401 656 ntBASIC21.24■□□□□ 0.99
RAF1P04049 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RAF1P04049 MIR3960-201ENST00000583311 91 ntBASIC21.24■□□□□ 0.99
RAF1P04049 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAF1P04049 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.24■□□□□ 0.99
RAF1P04049 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAF1P04049 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms