Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
HLA-DQA2P01906 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DQA2P01906 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DQA2P01906 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DQA2P01906 AC093323.1-202ENST00000635031 2045 ntBASIC21.16■□□□□ 0.98
HLA-DQA2P01906 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DQA2P01906 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HLA-DQA2P01906 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DQA2P01906 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DQA2P01906 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DQA2P01906 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HLA-DQA2P01906 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQA2P01906 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQA2P01906 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQA2P01906 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQA2P01906 ECEL1P2-201ENST00000461596 1295 ntBASIC21.15■□□□□ 0.98
HLA-DQA2P01906 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.15■□□□□ 0.98
HLA-DQA2P01906 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQA2P01906 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.15■□□□□ 0.98
HLA-DQA2P01906 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQA2P01906 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HLA-DQA2P01906 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQA2P01906 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQA2P01906 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HLA-DQA2P01906 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
HLA-DQA2P01906 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HLA-DQA2P01906 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-DQA2P01906 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-DQA2P01906 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-DQA2P01906 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-DQA2P01906 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.14■□□□□ 0.97
HLA-DQA2P01906 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.14■□□□□ 0.97
HLA-DQA2P01906 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-DQA2P01906 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-DQA2P01906 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HLA-DQA2P01906 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-DQA2P01906 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.14■□□□□ 0.97
HLA-DQA2P01906 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQA2P01906 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.13■□□□□ 0.97
HLA-DQA2P01906 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.13■□□□□ 0.97
HLA-DQA2P01906 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQA2P01906 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.13■□□□□ 0.97
HLA-DQA2P01906 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DQA2P01906 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.12■□□□□ 0.97
HLA-DQA2P01906 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DQA2P01906 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
HLA-DQA2P01906 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DQA2P01906 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DQA2P01906 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DQA2P01906 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQA2P01906 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQA2P01906 RP9P-202ENST00000450133 1212 ntBASIC21.11■□□□□ 0.97
HLA-DQA2P01906 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQA2P01906 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQA2P01906 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQA2P01906 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HLA-DQA2P01906 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DQA2P01906 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQA2P01906 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
HLA-DQA2P01906 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.09■□□□□ 0.97
HLA-DQA2P01906 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.09■□□□□ 0.97
HLA-DQA2P01906 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.09■□□□□ 0.97
HLA-DQA2P01906 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.09■□□□□ 0.97
HLA-DQA2P01906 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQA2P01906 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DQA2P01906 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
HLA-DQA2P01906 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
HLA-DQA2P01906 SLC6A10P-202ENST00000431994 2058 ntBASIC21.08■□□□□ 0.97
HLA-DQA2P01906 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DQA2P01906 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
HLA-DQA2P01906 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DQA2P01906 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DQA2P01906 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
HLA-DQA2P01906 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DQA2P01906 AC093536.1-201ENST00000569153 554 ntBASIC21.08■□□□□ 0.97
HLA-DQA2P01906 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HLA-DQA2P01906 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQA2P01906 AL139125.2-201ENST00000623134 1869 ntBASIC21.07■□□□□ 0.96
HLA-DQA2P01906 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQA2P01906 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQA2P01906 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.07■□□□□ 0.96
HLA-DQA2P01906 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.07■□□□□ 0.96
HLA-DQA2P01906 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQA2P01906 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.07■□□□□ 0.96
HLA-DQA2P01906 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQA2P01906 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.07■□□□□ 0.96
HLA-DQA2P01906 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DQA2P01906 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQA2P01906 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQA2P01906 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQA2P01906 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQA2P01906 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQA2P01906 MIR4449-201ENST00000578365 66 ntBASIC21.06■□□□□ 0.96
HLA-DQA2P01906 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQA2P01906 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HLA-DQA2P01906 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DQA2P01906 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.05■□□□□ 0.96
HLA-DQA2P01906 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQA2P01906 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DQA2P01906 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms