Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 AC010501.1-201ENST00000606270 1962 ntBASIC16.64■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.64■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 AL139125.2-201ENST00000623134 1869 ntBASIC16.64■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 AC138932.3-201ENST00000567634 1902 ntBASIC16.64■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 AC133561.1-201ENST00000568600 2415 ntBASIC16.64■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 AC022211.4-201ENST00000625094 2161 ntBASIC16.62■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 GPX1-201ENST00000419349 1106 ntBASIC16.62■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 AC060814.1-201ENST00000554326 538 ntBASIC16.62■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.61■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.61■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.6■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV8-3A0A0A6YYJ7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-3A0A0A6YYJ7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms