Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 PIN1P1-201ENST00000412108 996 ntBASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 AC105233.2-201ENST00000523697 349 ntBASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 AF228730.5-201ENST00000530288 346 ntBASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 AC021097.1-201ENST00000607902 574 ntBASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHGA9Q9Y5G4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 AC018529.1-201ENST00000613063 361 ntBASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 AC131009.4-201ENST00000624048 1740 ntBASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA9Q9Y5G4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 AC100757.3-201ENST00000622361 1406 ntBASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA9Q9Y5G4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms