Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 AC012640.2-201ENST00000561606 901 ntBASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 AL356488.2-201ENST00000602755 427 ntBASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 AL031008.1-201ENST00000619963 541 ntBASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 MIR1199-201ENST00000621445 119 ntBASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 AP002414.3-201ENST00000589352 1468 ntBASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 RPS2P28-201ENST00000314255 741 ntBASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 FAAHP1-202ENST00000446499 1238 ntBASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 KRT126P-201ENST00000549467 1181 ntBASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 MPDU1-223ENST00000582151 728 ntBASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 GGTLC5P-201ENST00000617623 998 ntBASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 AL596087.1-201ENST00000400979 1969 ntBASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 AL603832.2-201ENST00000566195 2125 ntBASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.47□□□□□ -0.09
RHBDD3Q9Y3P4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms