Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 AP001889.1-201ENST00000525414 633 ntBASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 AC036164.1-201ENST00000570544 333 ntBASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXXC1Q9P0U4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 Z97205.2-201ENST00000564697 1639 ntBASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 PFN1P12-201ENST00000455938 534 ntBASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 AP000812.2-201ENST00000538934 718 ntBASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 RHOQP1-201ENST00000555758 579 ntBASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 C2orf69P2-201ENST00000562032 1123 ntBASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.44■□□□□ 0.38
CXXC1Q9P0U4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 GPAA1P2-202ENST00000606848 1787 ntBASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 AC009542.2-202ENST00000619004 1067 ntBASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 AL391256.1-201ENST00000443260 1855 ntBASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CXXC1Q9P0U4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 CROCCP2-202ENST00000412962 2773 ntBASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms