Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ECHDC1Q9NTX5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.02■□□□□ 0.79
ECHDC1Q9NTX5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
ECHDC1Q9NTX5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.02■□□□□ 0.79
ECHDC1Q9NTX5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.02■□□□□ 0.79
ECHDC1Q9NTX5 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 AC004967.1-201ENST00000453589 447 ntBASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 AC098859.1-201ENST00000502915 1238 ntBASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 AC093520.2-201ENST00000561830 333 ntBASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC1Q9NTX5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 SPTSSB-204ENST00000617024 1292 ntBASIC20■□□□□ 0.79
ECHDC1Q9NTX5 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20■□□□□ 0.79
ECHDC1Q9NTX5 AL596087.1-201ENST00000400979 1969 ntBASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 UXT-AS1-201ENST00000590504 1525 ntBASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 AC254562.1-201ENST00000417586 456 ntBASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC1Q9NTX5 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms