Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 AC067930.6-201ENST00000623257 4947 ntBASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE2Q9NRR3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 CDK2AP2P3-201ENST00000422476 372 ntBASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 AC005412.3-201ENST00000580309 715 ntBASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 AL355877.3-201ENST00000622820 899 ntBASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 AL805961.1-202ENST00000641562 540 ntBASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 FES-204ENST00000414248 2327 ntTSL 2 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CDC42SE2Q9NRR3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
CDC42SE2Q9NRR3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
CDC42SE2Q9NRR3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CDC42SE2Q9NRR3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CDC42SE2Q9NRR3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.36□□□□□ -0.59
CDC42SE2Q9NRR3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC11.36□□□□□ -0.59
CDC42SE2Q9NRR3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CDC42SE2Q9NRR3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms