Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 RNU1-129P-201ENST00000384064 167 ntBASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 AC136632.2-201ENST00000512891 861 ntBASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 U1.21-201ENST00000580816 167 ntBASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 AL121772.3-201ENST00000610840 674 ntBASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 AC093458.2-201ENST00000623150 629 ntBASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 AC099063.4-201ENST00000641099 1602 ntBASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC52A3Q9NQ40 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 AL109954.1-202ENST00000564051 2148 ntBASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 TMBIM7P-203ENST00000641617 1718 ntBASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 HMGA1P7-201ENST00000406908 502 ntBASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 FAM185BP-201ENST00000443595 716 ntBASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 MIR4515-201ENST00000584082 81 ntBASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC52A3Q9NQ40 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC52A3Q9NQ40 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SLC52A3Q9NQ40 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC52A3Q9NQ40 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms