Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 Z97205.2-201ENST00000564697 1639 ntBASIC15.01□□□□□ -0.01
CHD8Q9HCK8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15□□□□□ -0.01
CHD8Q9HCK8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CHD8Q9HCK8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15□□□□□ -0.01
CHD8Q9HCK8 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15□□□□□ -0.01
CHD8Q9HCK8 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15□□□□□ -0.01
CHD8Q9HCK8 AC098935.1-201ENST00000446057 611 ntBASIC15□□□□□ -0.01
CHD8Q9HCK8 HSPB1P2-201ENST00000448722 546 ntBASIC15□□□□□ -0.01
CHD8Q9HCK8 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15□□□□□ -0.01
CHD8Q9HCK8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15□□□□□ -0.01
CHD8Q9HCK8 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC15□□□□□ -0.01
CHD8Q9HCK8 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15□□□□□ -0.01
CHD8Q9HCK8 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15□□□□□ -0.01
CHD8Q9HCK8 AP001065.2-201ENST00000617205 644 ntBASIC15□□□□□ -0.01
CHD8Q9HCK8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CHD8Q9HCK8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15□□□□□ -0.01
CHD8Q9HCK8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15□□□□□ -0.01
CHD8Q9HCK8 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CHD8Q9HCK8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15□□□□□ -0.01
CHD8Q9HCK8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15□□□□□ -0.01
CHD8Q9HCK8 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
CHD8Q9HCK8 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 AC234782.1-201ENST00000451950 919 ntBASIC15□□□□□ -0.01
CHD8Q9HCK8 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15□□□□□ -0.01
CHD8Q9HCK8 AC023310.1-201ENST00000554836 735 ntBASIC15□□□□□ -0.01
CHD8Q9HCK8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
CHD8Q9HCK8 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15□□□□□ -0.01
CHD8Q9HCK8 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15□□□□□ -0.01
CHD8Q9HCK8 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CHD8Q9HCK8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15□□□□□ -0.01
CHD8Q9HCK8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15□□□□□ -0.01
CHD8Q9HCK8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15□□□□□ -0.01
CHD8Q9HCK8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 AC008132.1-202ENST00000342005 1389 ntBASIC15□□□□□ -0.01
CHD8Q9HCK8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHD8Q9HCK8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 AL136982.4-201ENST00000437689 1740 ntBASIC14.99□□□□□ -0.01
CHD8Q9HCK8 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 AL355312.1-201ENST00000407115 2176 ntBASIC14.99□□□□□ -0.01
CHD8Q9HCK8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC14.99□□□□□ -0.01
CHD8Q9HCK8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms