Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRDL1Q9BU40 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 AL021920.2-201ENST00000624828 1351 ntBASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.16□□□□□ -0.3
CHRDL1Q9BU40 AC006504.4-201ENST00000592118 1568 ntBASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 AC005052.1-201ENST00000625181 2492 ntBASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHRDL1Q9BU40 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CHRDL1Q9BU40 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.15□□□□□ -0.31
CHRDL1Q9BU40 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CHRDL1Q9BU40 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
CHRDL1Q9BU40 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CHRDL1Q9BU40 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms