Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 PMS2P4-201ENST00000412466 1052 ntBASIC11.52□□□□□ -0.57
UPK3BQ9BT76 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 RN7SL589P-201ENST00000481268 310 ntBASIC11.52□□□□□ -0.57
UPK3BQ9BT76 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 AC131009.4-201ENST00000624048 1740 ntBASIC11.52□□□□□ -0.57
UPK3BQ9BT76 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 PCDHB19P-201ENST00000570871 2371 ntBASIC11.52□□□□□ -0.57
UPK3BQ9BT76 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 AL023806.1-201ENST00000603994 1649 ntBASIC11.51□□□□□ -0.57
UPK3BQ9BT76 AC092919.2-201ENST00000623631 1645 ntBASIC11.51□□□□□ -0.57
UPK3BQ9BT76 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 STOM-202ENST00000347359 870 ntTSL 2 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 AL355306.1-201ENST00000415580 579 ntBASIC11.51□□□□□ -0.57
UPK3BQ9BT76 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 CNN2P11-201ENST00000429351 262 ntBASIC11.51□□□□□ -0.57
UPK3BQ9BT76 ADH5P3-201ENST00000433842 1137 ntBASIC11.51□□□□□ -0.57
UPK3BQ9BT76 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 GATB-205ENST00000508611 605 ntTSL 2 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 AP002490.2-201ENST00000524791 560 ntBASIC11.51□□□□□ -0.57
UPK3BQ9BT76 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11.51□□□□□ -0.57
UPK3BQ9BT76 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 AL009183.1-201ENST00000603760 355 ntBASIC11.51□□□□□ -0.57
UPK3BQ9BT76 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.51□□□□□ -0.57
UPK3BQ9BT76 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 NORAD-201ENST00000565493 5339 ntBASIC11.51□□□□□ -0.57
UPK3BQ9BT76 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC11.51□□□□□ -0.57
UPK3BQ9BT76 AKAP8P1-201ENST00000434743 1349 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms