Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 MPI-205ENST00000562606 1052 ntTSL 3 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 PRR29-207ENST00000580752 458 ntTSL 3 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 OS9-205ENST00000413095 1660 ntTSL 2 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LIMD2Q9BT23 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 GID4-202ENST00000376345 1391 ntTSL 3 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 TP73-201ENST00000346387 4854 ntTSL 5 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 FOSL1P1-201ENST00000511041 816 ntBASIC9.88□□□□□ -0.83
LIMD2Q9BT23 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 AP005117.1-201ENST00000584346 1413 ntBASIC9.88□□□□□ -0.83
LIMD2Q9BT23 AL603756.1-201ENST00000606511 2163 ntBASIC9.88□□□□□ -0.83
LIMD2Q9BT23 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LIMD2Q9BT23 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms