Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC3BQ96PB8 LINC01144-201ENST00000626198 1710 ntBASIC16.67■□□□□ 0.26
LRRC3BQ96PB8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC3BQ96PB8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC3BQ96PB8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC3BQ96PB8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC3BQ96PB8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC3BQ96PB8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC3BQ96PB8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 HLA-A-202ENST00000376806 1854 ntBASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 AC123567.1-201ENST00000548294 1261 ntBASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 AC099568.2-201ENST00000609194 695 ntBASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC3BQ96PB8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 AC009053.2-201ENST00000563701 2365 ntBASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC3BQ96PB8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
LRRC3BQ96PB8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 HLA-V-201ENST00000429037 534 ntBASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 ACA64.2-201ENST00000459014 129 ntBASIC16.64■□□□□ 0.25
LRRC3BQ96PB8 AC011495.1-201ENST00000498085 584 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms