Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SIPA1Q96FS4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 AC009407.1-201ENST00000568958 598 ntBASIC16.46■□□□□ 0.23
SIPA1Q96FS4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 AL133215.2-201ENST00000609242 977 ntBASIC16.46■□□□□ 0.23
SIPA1Q96FS4 AL844908.2-201ENST00000609461 460 ntBASIC16.46■□□□□ 0.23
SIPA1Q96FS4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 AC025048.6-201ENST00000634326 1161 ntBASIC16.46■□□□□ 0.23
SIPA1Q96FS4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.46■□□□□ 0.23
SIPA1Q96FS4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.46■□□□□ 0.22
SIPA1Q96FS4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.46■□□□□ 0.22
SIPA1Q96FS4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SIPA1Q96FS4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SIPA1Q96FS4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
SIPA1Q96FS4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SIPA1Q96FS4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 AC008738.7-201ENST00000609744 511 ntBASIC16.45■□□□□ 0.22
SIPA1Q96FS4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.45■□□□□ 0.22
SIPA1Q96FS4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms