Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CPNE2Q96FN4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CPNE2Q96FN4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 GGT3P-204ENST00000453783 1664 ntBASIC14.39□□□□□ -0.11
CPNE2Q96FN4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 OR2I1P-209ENST00000641730 5365 ntBASIC14.39□□□□□ -0.11
CPNE2Q96FN4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 MPDU1-223ENST00000582151 728 ntBASIC14.39□□□□□ -0.11
CPNE2Q96FN4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 LINC01711-201ENST00000598340 967 ntBASIC14.39□□□□□ -0.11
CPNE2Q96FN4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 AL161772.1-201ENST00000610494 4412 ntBASIC14.39□□□□□ -0.11
CPNE2Q96FN4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 AC105917.1-201ENST00000506637 2539 ntBASIC14.39□□□□□ -0.11
CPNE2Q96FN4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CPNE2Q96FN4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 PAWRP1-201ENST00000451083 565 ntBASIC14.38□□□□□ -0.11
CPNE2Q96FN4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 POU5F1P6-201ENST00000466990 990 ntBASIC14.38□□□□□ -0.11
CPNE2Q96FN4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 NKAPP1-205ENST00000585790 367 ntBASIC14.38□□□□□ -0.11
CPNE2Q96FN4 AC006557.2-201ENST00000592985 1240 ntBASIC14.38□□□□□ -0.11
CPNE2Q96FN4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 KRT8P39-201ENST00000396270 1433 ntBASIC14.38□□□□□ -0.11
CPNE2Q96FN4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.38□□□□□ -0.11
CPNE2Q96FN4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms