Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 AL592424.1-201ENST00000563624 1536 ntBASIC17■□□□□ 0.31
PCDH19Q8TAB3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
PCDH19Q8TAB3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17■□□□□ 0.31
PCDH19Q8TAB3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDH19Q8TAB3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 AC092183.1-201ENST00000469884 875 ntBASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
PCDH19Q8TAB3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 AC024909.3-201ENST00000611513 2257 ntBASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDH19Q8TAB3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 AL603832.2-201ENST00000566195 2125 ntBASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 AC093724.1-201ENST00000448659 1027 ntBASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 KRT18P34-201ENST00000488218 1270 ntBASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 AC112482.1-201ENST00000492080 688 ntBASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDH19Q8TAB3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms