Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 AC026396.1-201ENST00000419388 421 ntBASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 AC103702.1-201ENST00000548801 2630 ntBASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TTC9CQ8N5M4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 MTHFR-217ENST00000641820 1569 ntBASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 AC109635.5-201ENST00000533593 962 ntBASIC13.04□□□□□ -0.32
TTC9CQ8N5M4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms