Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 UBALD1-205ENST00000590891 2641 ntBASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 AP001094.4-201ENST00000579008 2176 ntBASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 SPCS2P4-201ENST00000436160 681 ntBASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 KRT8P23-201ENST00000560090 1207 ntBASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 AC025678.2-201ENST00000562061 970 ntBASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 AC093028.1-201ENST00000622998 982 ntBASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 AL671710.1-201ENST00000610245 2349 ntBASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 KRT8P39-201ENST00000396270 1433 ntBASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM48Q8IWZ4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 AL162727.3-201ENST00000635661 2787 ntBASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 AC069335.1-201ENST00000489972 472 ntBASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 AC027307.2-201ENST00000591252 911 ntBASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 AC009093.7-201ENST00000623853 1223 ntBASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 LINC00628-201ENST00000628516 1289 ntBASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms