Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 STX1A-203ENST00000395155 783 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 AL139011.1-202ENST00000642063 584 ntBASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 AC078925.2-201ENST00000624013 1973 ntBASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC9.99□□□□□ -0.81
VPS13BQ7Z7G8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 AC080080.1-201ENST00000625121 2420 ntBASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 AC009542.2-202ENST00000619004 1067 ntBASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 AL022328.1-201ENST00000610050 478 ntBASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 CALR4P-201ENST00000431943 946 ntBASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 AC074044.1-201ENST00000609673 707 ntBASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 HNRNPA1P48-201ENST00000562726 1377 ntBASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
VPS13BQ7Z7G8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 KRT8P22-201ENST00000562317 1415 ntBASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 AC007969.1-201ENST00000433675 447 ntBASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 FTH1P14-201ENST00000482930 551 ntBASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms