Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD2Q7Z408 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.63□□□□□ -0.23
CSMD2Q7Z408 AC093724.1-201ENST00000448659 1027 ntBASIC13.63□□□□□ -0.23
CSMD2Q7Z408 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.63□□□□□ -0.23
CSMD2Q7Z408 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD2Q7Z408 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.63□□□□□ -0.23
CSMD2Q7Z408 LINC01451-201ENST00000623792 534 ntBASIC13.63□□□□□ -0.23
CSMD2Q7Z408 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD2Q7Z408 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD2Q7Z408 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD2Q7Z408 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSMD2Q7Z408 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CSMD2Q7Z408 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.63□□□□□ -0.23
CSMD2Q7Z408 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.63□□□□□ -0.23
CSMD2Q7Z408 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 AL022328.3-201ENST00000607943 679 ntBASIC13.62□□□□□ -0.23
CSMD2Q7Z408 AP001505.2-201ENST00000616815 443 ntBASIC13.62□□□□□ -0.23
CSMD2Q7Z408 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 AC106760.1-201ENST00000508690 800 ntBASIC13.62□□□□□ -0.23
CSMD2Q7Z408 ENPP7P5-201ENST00000541031 1031 ntBASIC13.62□□□□□ -0.23
CSMD2Q7Z408 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 PTP4A1P2-201ENST00000546033 454 ntBASIC13.62□□□□□ -0.23
CSMD2Q7Z408 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 LINC01115-203ENST00000606068 577 ntBASIC13.62□□□□□ -0.23
CSMD2Q7Z408 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSMD2Q7Z408 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 ABALON-201ENST00000629058 1903 ntBASIC13.61□□□□□ -0.23
CSMD2Q7Z408 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 MIR6069-201ENST00000620069 79 ntBASIC13.61□□□□□ -0.23
CSMD2Q7Z408 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 KRT8P37-201ENST00000451609 1420 ntBASIC13.61□□□□□ -0.23
CSMD2Q7Z408 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 AC079328.2-201ENST00000561241 3354 ntBASIC13.61□□□□□ -0.23
CSMD2Q7Z408 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CSMD2Q7Z408 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.6□□□□□ -0.23
CSMD2Q7Z408 AC104784.1-201ENST00000473096 294 ntBASIC13.6□□□□□ -0.23
CSMD2Q7Z408 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.6□□□□□ -0.23
CSMD2Q7Z408 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.6□□□□□ -0.23
CSMD2Q7Z408 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
CSMD2Q7Z408 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms