Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 AC004987.2-201ENST00000395959 1148 ntBASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 FGFR3P5-201ENST00000564496 886 ntBASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 AC093813.1-201ENST00000605066 256 ntBASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 AC015818.8-201ENST00000587907 1519 ntBASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 U82695.1-201ENST00000635752 1889 ntBASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 AC079178.1-201ENST00000420915 656 ntBASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 CFL1-214ENST00000534769 758 ntTSL 2 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 MIR7845-201ENST00000618396 99 ntBASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 AC079336.7-201ENST00000623428 1078 ntBASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.36■□□□□ 0.85
RGPD4Q7Z3J3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RGPD4Q7Z3J3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RGPD4Q7Z3J3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
RGPD4Q7Z3J3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.35■□□□□ 0.85
RGPD4Q7Z3J3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC20.35■□□□□ 0.85
RGPD4Q7Z3J3 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RGPD4Q7Z3J3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC20.35■□□□□ 0.85
RGPD4Q7Z3J3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC20.35■□□□□ 0.85
RGPD4Q7Z3J3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RGPD4Q7Z3J3 NKG7-204ENST00000595217 816 ntTSL 2 BASIC20.35■□□□□ 0.85
RGPD4Q7Z3J3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RGPD4Q7Z3J3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RGPD4Q7Z3J3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 AC006453.4-201ENST00000636949 1252 ntBASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 ACTBP8-201ENST00000403258 1108 ntBASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 SERPINA13P-202ENST00000478994 924 ntBASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 AC104982.3-201ENST00000581995 514 ntBASIC20.34■□□□□ 0.85
RGPD4Q7Z3J3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms