Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PAWRP1-201ENST00000451083 565 ntBASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 AL513480.1-201ENST00000451731 511 ntBASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 AC087163.2-201ENST00000457299 853 ntBASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 PGAM5P1-201ENST00000518923 814 ntBASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 AC018845.2-201ENST00000568326 409 ntBASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 AC023141.13-201ENST00000604991 943 ntBASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 GPALPP1-207ENST00000611650 899 ntBASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP1BQ7LBR1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 BCAR1-209ENST00000546196 1340 ntBASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 PCDHA14-201ENST00000506751 2298 ntBASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP1BQ7LBR1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 AC004832.2-201ENST00000426397 482 ntBASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 KRT18P2-201ENST00000447938 1258 ntBASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 AC004877.2-201ENST00000623941 599 ntBASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP1BQ7LBR1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP1BQ7LBR1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP1BQ7LBR1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
CHMP1BQ7LBR1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CHMP1BQ7LBR1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHMP1BQ7LBR1 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms