Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRAMEF20Q5VT98 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.08■□□□□ 0
PRAMEF20Q5VT98 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.08■□□□□ 0
PRAMEF20Q5VT98 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 AC142381.1-201ENST00000426099 345 ntBASIC15.07■□□□□ 0
PRAMEF20Q5VT98 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 AC020765.3-201ENST00000613051 740 ntBASIC15.07■□□□□ 0
PRAMEF20Q5VT98 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 PCGF3-213ENST00000620529 1899 ntBASIC15.07■□□□□ 0
PRAMEF20Q5VT98 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 AGGF1P2-201ENST00000426656 2106 ntBASIC15.07■□□□□ 0
PRAMEF20Q5VT98 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PRAMEF20Q5VT98 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 NKILA-202ENST00000614771 2598 ntBASIC15.06■□□□□ 0
PRAMEF20Q5VT98 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 MIR346-201ENST00000362234 95 ntBASIC15.06■□□□□ 0
PRAMEF20Q5VT98 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 SPDYE14P-201ENST00000442619 822 ntBASIC15.06■□□□□ 0
PRAMEF20Q5VT98 FAM86GP-201ENST00000448322 971 ntBASIC15.06■□□□□ 0
PRAMEF20Q5VT98 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 ALG1L8P-201ENST00000533887 760 ntBASIC15.06■□□□□ 0
PRAMEF20Q5VT98 AC026150.2-201ENST00000564693 1156 ntBASIC15.06■□□□□ 0
PRAMEF20Q5VT98 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 MIR6080-201ENST00000617359 66 ntBASIC15.06■□□□□ 0
PRAMEF20Q5VT98 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PRAMEF20Q5VT98 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms