Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.14□□□□□ -0.15
ABCA4P78363 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ABCA4P78363 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCA4P78363 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ABCA4P78363 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCA4P78363 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCA4P78363 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCA4P78363 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
ABCA4P78363 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCA4P78363 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCA4P78363 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ABCA4P78363 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ABCA4P78363 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ABCA4P78363 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.13□□□□□ -0.15
ABCA4P78363 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.13□□□□□ -0.15
ABCA4P78363 TPRX2P-201ENST00000535362 881 ntBASIC14.13□□□□□ -0.15
ABCA4P78363 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.13□□□□□ -0.15
ABCA4P78363 AL033527.5-202ENST00000641632 1098 ntBASIC14.13□□□□□ -0.15
ABCA4P78363 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
ABCA4P78363 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.13□□□□□ -0.15
ABCA4P78363 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ABCA4P78363 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
ABCA4P78363 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.13□□□□□ -0.15
ABCA4P78363 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ABCA4P78363 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.13□□□□□ -0.15
ABCA4P78363 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 RPL37AP1-201ENST00000412502 279 ntBASIC14.13□□□□□ -0.15
ABCA4P78363 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.13□□□□□ -0.15
ABCA4P78363 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.13□□□□□ -0.15
ABCA4P78363 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.13□□□□□ -0.15
ABCA4P78363 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.13□□□□□ -0.15
ABCA4P78363 MIR4538-201ENST00000581377 78 ntBASIC14.13□□□□□ -0.15
ABCA4P78363 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
ABCA4P78363 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ABCA4P78363 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.13□□□□□ -0.15
ABCA4P78363 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.13□□□□□ -0.15
ABCA4P78363 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
ABCA4P78363 AC005332.8-201ENST00000622750 2735 ntBASIC14.13□□□□□ -0.15
ABCA4P78363 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.13□□□□□ -0.15
ABCA4P78363 KRT8P39-201ENST00000396270 1433 ntBASIC14.13□□□□□ -0.15
ABCA4P78363 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.13□□□□□ -0.15
ABCA4P78363 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
ABCA4P78363 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ABCA4P78363 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
ABCA4P78363 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
ABCA4P78363 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCA4P78363 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ABCA4P78363 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCA4P78363 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.12□□□□□ -0.15
ABCA4P78363 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCA4P78363 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCA4P78363 RN7SL618P-201ENST00000477850 296 ntBASIC14.12□□□□□ -0.15
ABCA4P78363 AC124947.2-201ENST00000547118 1133 ntBASIC14.12□□□□□ -0.15
ABCA4P78363 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCA4P78363 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCA4P78363 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ABCA4P78363 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCA4P78363 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
ABCA4P78363 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCA4P78363 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 TOP3BP1-201ENST00000420768 1380 ntBASIC14.12□□□□□ -0.15
ABCA4P78363 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ABCA4P78363 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.12□□□□□ -0.15
ABCA4P78363 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ABCA4P78363 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCA4P78363 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
ABCA4P78363 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms