Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
WNT3AP56704 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3AP56704 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3AP56704 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3AP56704 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3AP56704 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3AP56704 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3AP56704 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
WNT3AP56704 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
WNT3AP56704 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.63■□□□□ 0.25
WNT3AP56704 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.63■□□□□ 0.25
WNT3AP56704 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.63■□□□□ 0.25
WNT3AP56704 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.63■□□□□ 0.25
WNT3AP56704 AC004832.2-201ENST00000426397 482 ntBASIC16.63■□□□□ 0.25
WNT3AP56704 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.63■□□□□ 0.25
WNT3AP56704 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
WNT3AP56704 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
WNT3AP56704 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
WNT3AP56704 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3AP56704 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.63■□□□□ 0.25
WNT3AP56704 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
WNT3AP56704 AC092902.6-201ENST00000641783 218 ntBASIC16.63■□□□□ 0.25
WNT3AP56704 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3AP56704 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3AP56704 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
WNT3AP56704 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3AP56704 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
WNT3AP56704 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3AP56704 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3AP56704 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.63■□□□□ 0.25
WNT3AP56704 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3AP56704 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.63■□□□□ 0.25
WNT3AP56704 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3AP56704 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3AP56704 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
WNT3AP56704 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.63■□□□□ 0.25
WNT3AP56704 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3AP56704 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
WNT3AP56704 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.62■□□□□ 0.25
WNT3AP56704 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
WNT3AP56704 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
WNT3AP56704 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.62■□□□□ 0.25
WNT3AP56704 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 AL513523.2-202ENST00000427283 2040 ntBASIC16.62■□□□□ 0.25
WNT3AP56704 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.62■□□□□ 0.25
WNT3AP56704 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
WNT3AP56704 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT3AP56704 AC093724.1-201ENST00000448659 1027 ntBASIC16.62■□□□□ 0.25
WNT3AP56704 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.62■□□□□ 0.25
WNT3AP56704 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.62■□□□□ 0.25
WNT3AP56704 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT3AP56704 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.62■□□□□ 0.25
WNT3AP56704 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.62■□□□□ 0.25
WNT3AP56704 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.62■□□□□ 0.25
WNT3AP56704 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT3AP56704 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT3AP56704 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.62■□□□□ 0.25
WNT3AP56704 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
WNT3AP56704 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.62■□□□□ 0.25
WNT3AP56704 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.62■□□□□ 0.25
WNT3AP56704 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT3AP56704 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.62■□□□□ 0.25
WNT3AP56704 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
WNT3AP56704 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT3AP56704 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.62■□□□□ 0.25
WNT3AP56704 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT3AP56704 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT3AP56704 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
WNT3AP56704 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3AP56704 AC073439.1-201ENST00000624121 1774 ntBASIC16.61■□□□□ 0.25
WNT3AP56704 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
WNT3AP56704 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3AP56704 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
WNT3AP56704 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.61■□□□□ 0.25
WNT3AP56704 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
WNT3AP56704 AL592424.1-201ENST00000563624 1536 ntBASIC16.61■□□□□ 0.25
WNT3AP56704 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.61■□□□□ 0.25
WNT3AP56704 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.61■□□□□ 0.25
WNT3AP56704 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.61■□□□□ 0.25
WNT3AP56704 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms