Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.35■□□□□ 0.21
ZNF140P52738 AF228730.5-201ENST00000530288 346 ntBASIC16.35■□□□□ 0.21
ZNF140P52738 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.35■□□□□ 0.21
ZNF140P52738 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.35■□□□□ 0.21
ZNF140P52738 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.35■□□□□ 0.21
ZNF140P52738 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.35■□□□□ 0.21
ZNF140P52738 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 SPDYE9P-201ENST00000570642 692 ntBASIC16.35■□□□□ 0.21
ZNF140P52738 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 SPDYE10P-202ENST00000612005 668 ntBASIC16.35■□□□□ 0.21
ZNF140P52738 SPDYE8P-202ENST00000612377 668 ntBASIC16.35■□□□□ 0.21
ZNF140P52738 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.35■□□□□ 0.21
ZNF140P52738 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
ZNF140P52738 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.35■□□□□ 0.21
ZNF140P52738 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.35■□□□□ 0.21
ZNF140P52738 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.35■□□□□ 0.21
ZNF140P52738 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.35■□□□□ 0.21
ZNF140P52738 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ZNF140P52738 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
ZNF140P52738 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF140P52738 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF140P52738 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.34■□□□□ 0.21
ZNF140P52738 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.34■□□□□ 0.21
ZNF140P52738 AC142381.1-201ENST00000426099 345 ntBASIC16.34■□□□□ 0.21
ZNF140P52738 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.34■□□□□ 0.21
ZNF140P52738 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.34■□□□□ 0.21
ZNF140P52738 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF140P52738 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ZNF140P52738 TIMM8BP1-201ENST00000452384 211 ntBASIC16.34■□□□□ 0.21
ZNF140P52738 AC079140.1-201ENST00000508039 487 ntBASIC16.34■□□□□ 0.21
ZNF140P52738 LINC01225-203ENST00000563550 1244 ntBASIC16.34■□□□□ 0.21
ZNF140P52738 AC005829.1-201ENST00000570002 483 ntBASIC16.34■□□□□ 0.21
ZNF140P52738 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.34■□□□□ 0.21
ZNF140P52738 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.34■□□□□ 0.21
ZNF140P52738 AC027307.2-201ENST00000591252 911 ntBASIC16.34■□□□□ 0.21
ZNF140P52738 AC010327.4-202ENST00000591484 748 ntBASIC16.34■□□□□ 0.21
ZNF140P52738 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.34■□□□□ 0.21
ZNF140P52738 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.34■□□□□ 0.21
ZNF140P52738 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.34■□□□□ 0.21
ZNF140P52738 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.34■□□□□ 0.21
ZNF140P52738 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF140P52738 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF140P52738 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.33■□□□□ 0.21
ZNF140P52738 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF140P52738 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
ZNF140P52738 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF140P52738 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF140P52738 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF140P52738 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF140P52738 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
ZNF140P52738 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF140P52738 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ZNF140P52738 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF140P52738 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF140P52738 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF140P52738 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ZNF140P52738 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.33■□□□□ 0.2
ZNF140P52738 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.33■□□□□ 0.2
ZNF140P52738 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF140P52738 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.33■□□□□ 0.2
ZNF140P52738 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ZNF140P52738 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.33■□□□□ 0.2
ZNF140P52738 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
ZNF140P52738 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms