Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX5P48382 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX5P48382 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX5P48382 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX5P48382 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX5P48382 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX5P48382 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX5P48382 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX5P48382 AC245100.5-201ENST00000452108 331 ntBASIC20.04■□□□□ 0.8
RFX5P48382 AL139010.1-201ENST00000454878 894 ntBASIC20.04■□□□□ 0.8
RFX5P48382 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.04■□□□□ 0.8
RFX5P48382 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX5P48382 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.04■□□□□ 0.8
RFX5P48382 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RFX5P48382 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.04■□□□□ 0.8
RFX5P48382 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.04■□□□□ 0.8
RFX5P48382 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RFX5P48382 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX5P48382 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.04■□□□□ 0.8
RFX5P48382 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX5P48382 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.04■□□□□ 0.8
RFX5P48382 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX5P48382 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RFX5P48382 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RFX5P48382 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.03■□□□□ 0.8
RFX5P48382 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.03■□□□□ 0.8
RFX5P48382 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX5P48382 AL691432.1-201ENST00000596308 1422 ntBASIC20.03■□□□□ 0.8
RFX5P48382 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFX5P48382 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX5P48382 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.03■□□□□ 0.8
RFX5P48382 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX5P48382 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX5P48382 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX5P48382 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX5P48382 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC20.03■□□□□ 0.8
RFX5P48382 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX5P48382 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.03■□□□□ 0.8
RFX5P48382 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFX5P48382 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.03■□□□□ 0.8
RFX5P48382 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RFX5P48382 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX5P48382 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX5P48382 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.03■□□□□ 0.8
RFX5P48382 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.03■□□□□ 0.8
RFX5P48382 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.03■□□□□ 0.8
RFX5P48382 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.03■□□□□ 0.8
RFX5P48382 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.03■□□□□ 0.8
RFX5P48382 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.03■□□□□ 0.8
RFX5P48382 MIR3197-201ENST00000582241 73 ntBASIC20.03■□□□□ 0.8
RFX5P48382 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
RFX5P48382 LINC02084-201ENST00000606069 1096 ntBASIC20.03■□□□□ 0.8
RFX5P48382 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX5P48382 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RFX5P48382 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RFX5P48382 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX5P48382 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.03■□□□□ 0.8
RFX5P48382 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RFX5P48382 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RFX5P48382 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
RFX5P48382 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX5P48382 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.03■□□□□ 0.8
RFX5P48382 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RFX5P48382 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX5P48382 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RFX5P48382 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RFX5P48382 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
RFX5P48382 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
RFX5P48382 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX5P48382 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.02■□□□□ 0.8
RFX5P48382 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
RFX5P48382 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.02■□□□□ 0.8
RFX5P48382 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.02■□□□□ 0.8
RFX5P48382 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX5P48382 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.02■□□□□ 0.8
RFX5P48382 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.02■□□□□ 0.8
RFX5P48382 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.02■□□□□ 0.8
RFX5P48382 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.02■□□□□ 0.8
RFX5P48382 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX5P48382 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.02■□□□□ 0.8
RFX5P48382 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.02■□□□□ 0.8
RFX5P48382 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.02■□□□□ 0.8
RFX5P48382 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.02■□□□□ 0.8
RFX5P48382 AC010336.2-201ENST00000564226 506 ntBASIC20.02■□□□□ 0.8
RFX5P48382 MIR4745-201ENST00000577608 62 ntBASIC20.02■□□□□ 0.8
RFX5P48382 RN7SL204P-201ENST00000582831 262 ntBASIC20.02■□□□□ 0.8
RFX5P48382 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.02■□□□□ 0.8
RFX5P48382 AC092364.2-202ENST00000597012 1073 ntBASIC20.02■□□□□ 0.8
RFX5P48382 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX5P48382 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.02■□□□□ 0.8
RFX5P48382 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.02■□□□□ 0.8
RFX5P48382 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX5P48382 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.02■□□□□ 0.8
RFX5P48382 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX5P48382 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX5P48382 AC006449.6-201ENST00000612330 2296 ntBASIC20.02■□□□□ 0.8
RFX5P48382 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.02■□□□□ 0.8
RFX5P48382 AL662844.4-201ENST00000606367 2838 ntBASIC20.02■□□□□ 0.79
RFX5P48382 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFX5P48382 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms