Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
HTTP42858 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
HTTP42858 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HTTP42858 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
HTTP42858 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
HTTP42858 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
HTTP42858 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
HTTP42858 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.14■□□□□ 0.5
HTTP42858 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.14■□□□□ 0.5
HTTP42858 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
HTTP42858 AC097724.1-201ENST00000609581 426 ntBASIC18.14■□□□□ 0.5
HTTP42858 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.14■□□□□ 0.5
HTTP42858 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
HTTP42858 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
HTTP42858 FZD10-202ENST00000539839 3282 ntBASIC18.14■□□□□ 0.49
HTTP42858 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTTP42858 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTTP42858 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTTP42858 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTTP42858 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HTTP42858 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.14■□□□□ 0.49
HTTP42858 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
HTTP42858 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.14■□□□□ 0.49
HTTP42858 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.14■□□□□ 0.49
HTTP42858 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTTP42858 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.14■□□□□ 0.49
HTTP42858 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTTP42858 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HTTP42858 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.14■□□□□ 0.49
HTTP42858 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.14■□□□□ 0.49
HTTP42858 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.14■□□□□ 0.49
HTTP42858 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.14■□□□□ 0.49
HTTP42858 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HTTP42858 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.14■□□□□ 0.49
HTTP42858 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.14■□□□□ 0.49
HTTP42858 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.14■□□□□ 0.49
HTTP42858 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.14■□□□□ 0.49
HTTP42858 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTTP42858 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTTP42858 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTTP42858 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HTTP42858 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HTTP42858 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.13■□□□□ 0.49
HTTP42858 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTTP42858 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTTP42858 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HTTP42858 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTTP42858 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.13■□□□□ 0.49
HTTP42858 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.13■□□□□ 0.49
HTTP42858 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.13■□□□□ 0.49
HTTP42858 MIR4741-201ENST00000579822 90 ntBASIC18.13■□□□□ 0.49
HTTP42858 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.13■□□□□ 0.49
HTTP42858 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.13■□□□□ 0.49
HTTP42858 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
HTTP42858 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTTP42858 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTTP42858 AC016694.1-201ENST00000434179 700 ntBASIC18.13■□□□□ 0.49
HTTP42858 IMP3P2-201ENST00000489760 475 ntBASIC18.13■□□□□ 0.49
HTTP42858 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.13■□□□□ 0.49
HTTP42858 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.13■□□□□ 0.49
HTTP42858 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTTP42858 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HTTP42858 AC106820.2-201ENST00000563775 3264 ntBASIC18.13■□□□□ 0.49
HTTP42858 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTTP42858 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HTTP42858 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTTP42858 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTTP42858 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTTP42858 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.12■□□□□ 0.49
HTTP42858 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC18.12■□□□□ 0.49
HTTP42858 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.12■□□□□ 0.49
HTTP42858 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.12■□□□□ 0.49
HTTP42858 AC020914.3-201ENST00000594712 304 ntBASIC18.12■□□□□ 0.49
HTTP42858 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.12■□□□□ 0.49
HTTP42858 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.12■□□□□ 0.49
HTTP42858 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTTP42858 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HTTP42858 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.12■□□□□ 0.49
HTTP42858 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.12■□□□□ 0.49
HTTP42858 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HTTP42858 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTTP42858 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HTTP42858 AL355864.2-201ENST00000447420 863 ntBASIC18.12■□□□□ 0.49
HTTP42858 FAM86LP-201ENST00000478302 853 ntBASIC18.12■□□□□ 0.49
HTTP42858 RN7SL720P-201ENST00000488178 304 ntBASIC18.12■□□□□ 0.49
HTTP42858 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.12■□□□□ 0.49
HTTP42858 AL049840.4-201ENST00000602422 811 ntBASIC18.12■□□□□ 0.49
HTTP42858 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
HTTP42858 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.12■□□□□ 0.49
HTTP42858 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.12■□□□□ 0.49
HTTP42858 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.12■□□□□ 0.49
HTTP42858 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTTP42858 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
HTTP42858 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HTTP42858 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTTP42858 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTTP42858 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HTTP42858 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTTP42858 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTTP42858 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms