Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
GRIA1P42261 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.7■□□□□ 0.26
GRIA1P42261 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
GRIA1P42261 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
GRIA1P42261 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.7■□□□□ 0.26
GRIA1P42261 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
GRIA1P42261 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIA1P42261 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIA1P42261 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIA1P42261 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GRIA1P42261 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIA1P42261 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIA1P42261 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GRIA1P42261 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.7■□□□□ 0.26
GRIA1P42261 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIA1P42261 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.7■□□□□ 0.26
GRIA1P42261 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.7■□□□□ 0.26
GRIA1P42261 AC096734.2-201ENST00000562054 433 ntBASIC16.7■□□□□ 0.26
GRIA1P42261 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.7■□□□□ 0.26
GRIA1P42261 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.7■□□□□ 0.26
GRIA1P42261 Z83851.2-201ENST00000609564 659 ntBASIC16.7■□□□□ 0.26
GRIA1P42261 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GRIA1P42261 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GRIA1P42261 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
GRIA1P42261 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.69■□□□□ 0.26
GRIA1P42261 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
GRIA1P42261 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 LINC00554-201ENST00000564841 3011 ntBASIC16.69■□□□□ 0.26
GRIA1P42261 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
GRIA1P42261 KRT18P2-201ENST00000447938 1258 ntBASIC16.69■□□□□ 0.26
GRIA1P42261 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.69■□□□□ 0.26
GRIA1P42261 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.69■□□□□ 0.26
GRIA1P42261 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.69■□□□□ 0.26
GRIA1P42261 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.69■□□□□ 0.26
GRIA1P42261 AC034105.1-201ENST00000563488 319 ntBASIC16.69■□□□□ 0.26
GRIA1P42261 AC018845.2-201ENST00000568326 409 ntBASIC16.69■□□□□ 0.26
GRIA1P42261 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.69■□□□□ 0.26
GRIA1P42261 AL121894.2-201ENST00000602977 491 ntBASIC16.69■□□□□ 0.26
GRIA1P42261 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.69■□□□□ 0.26
GRIA1P42261 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.69■□□□□ 0.26
GRIA1P42261 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
GRIA1P42261 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 AC104109.2-201ENST00000602919 1418 ntBASIC16.69■□□□□ 0.26
GRIA1P42261 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GRIA1P42261 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GRIA1P42261 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GRIA1P42261 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GRIA1P42261 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.68■□□□□ 0.26
GRIA1P42261 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GRIA1P42261 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
GRIA1P42261 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GRIA1P42261 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GRIA1P42261 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
GRIA1P42261 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.68■□□□□ 0.26
GRIA1P42261 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.68■□□□□ 0.26
GRIA1P42261 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GRIA1P42261 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GRIA1P42261 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.68■□□□□ 0.26
GRIA1P42261 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.68■□□□□ 0.26
GRIA1P42261 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GRIA1P42261 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
GRIA1P42261 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms