Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.7■□□□□ 0.26
HADHAP40939 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.7■□□□□ 0.26
HADHAP40939 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.7■□□□□ 0.26
HADHAP40939 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.7■□□□□ 0.26
HADHAP40939 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HADHAP40939 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HADHAP40939 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.69■□□□□ 0.26
HADHAP40939 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.69■□□□□ 0.26
HADHAP40939 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
HADHAP40939 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HADHAP40939 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
HADHAP40939 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
HADHAP40939 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.69■□□□□ 0.26
HADHAP40939 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HADHAP40939 RNA5SP416-201ENST00000516838 111 ntBASIC16.69■□□□□ 0.26
HADHAP40939 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.69■□□□□ 0.26
HADHAP40939 MIR3909-201ENST00000579518 119 ntBASIC16.69■□□□□ 0.26
HADHAP40939 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.69■□□□□ 0.26
HADHAP40939 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.69■□□□□ 0.26
HADHAP40939 AC027601.4-201ENST00000611259 610 ntBASIC16.69■□□□□ 0.26
HADHAP40939 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.69■□□□□ 0.26
HADHAP40939 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.69■□□□□ 0.26
HADHAP40939 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HADHAP40939 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HADHAP40939 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.69■□□□□ 0.26
HADHAP40939 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.69■□□□□ 0.26
HADHAP40939 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.69■□□□□ 0.26
HADHAP40939 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.69■□□□□ 0.26
HADHAP40939 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HADHAP40939 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HADHAP40939 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HADHAP40939 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.68■□□□□ 0.26
HADHAP40939 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
HADHAP40939 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HADHAP40939 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.68■□□□□ 0.26
HADHAP40939 AL512652.2-201ENST00000625156 1716 ntBASIC16.68■□□□□ 0.26
HADHAP40939 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HADHAP40939 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HADHAP40939 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.68■□□□□ 0.26
HADHAP40939 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
HADHAP40939 HMGA1P7-201ENST00000406908 502 ntBASIC16.68■□□□□ 0.26
HADHAP40939 PMS2P4-201ENST00000412466 1052 ntBASIC16.68■□□□□ 0.26
HADHAP40939 AC007967.2-201ENST00000432613 625 ntBASIC16.68■□□□□ 0.26
HADHAP40939 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.68■□□□□ 0.26
HADHAP40939 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HADHAP40939 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.68■□□□□ 0.26
HADHAP40939 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.68■□□□□ 0.26
HADHAP40939 SLC25A1P1-201ENST00000528351 927 ntBASIC16.68■□□□□ 0.26
HADHAP40939 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.68■□□□□ 0.26
HADHAP40939 FAM197Y3-203ENST00000618346 717 ntBASIC16.68■□□□□ 0.26
HADHAP40939 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.68■□□□□ 0.26
HADHAP40939 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HADHAP40939 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HADHAP40939 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HADHAP40939 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HADHAP40939 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.68■□□□□ 0.26
HADHAP40939 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HADHAP40939 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.68■□□□□ 0.26
HADHAP40939 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms