Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN3P26045 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN3P26045 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PTPN3P26045 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN3P26045 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN3P26045 KRT18P34-201ENST00000488218 1270 ntBASIC16.79■□□□□ 0.28
PTPN3P26045 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.79■□□□□ 0.28
PTPN3P26045 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN3P26045 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.79■□□□□ 0.28
PTPN3P26045 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PTPN3P26045 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN3P26045 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PTPN3P26045 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN3P26045 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN3P26045 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN3P26045 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN3P26045 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN3P26045 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PTPN3P26045 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN3P26045 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PTPN3P26045 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN3P26045 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN3P26045 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN3P26045 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PTPN3P26045 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN3P26045 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PTPN3P26045 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 AL592424.1-201ENST00000563624 1536 ntBASIC16.78■□□□□ 0.28
PTPN3P26045 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
PTPN3P26045 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PTPN3P26045 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PTPN3P26045 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PTPN3P26045 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN3P26045 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN3P26045 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PTPN3P26045 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN3P26045 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN3P26045 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN3P26045 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PTPN3P26045 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN3P26045 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
PTPN3P26045 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.77■□□□□ 0.28
PTPN3P26045 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN3P26045 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.77■□□□□ 0.28
PTPN3P26045 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PTPN3P26045 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN3P26045 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.77■□□□□ 0.28
PTPN3P26045 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PTPN3P26045 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN3P26045 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN3P26045 AL022342.1-201ENST00000400363 863 ntBASIC16.77■□□□□ 0.28
PTPN3P26045 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN3P26045 AC093724.1-201ENST00000448659 1027 ntBASIC16.77■□□□□ 0.28
PTPN3P26045 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN3P26045 AC099522.2-201ENST00000607001 744 ntBASIC16.77■□□□□ 0.28
PTPN3P26045 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN3P26045 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.77■□□□□ 0.28
PTPN3P26045 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.77■□□□□ 0.28
PTPN3P26045 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN3P26045 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PTPN3P26045 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN3P26045 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN3P26045 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
PTPN3P26045 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.77■□□□□ 0.27
PTPN3P26045 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PTPN3P26045 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN3P26045 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
PTPN3P26045 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.77■□□□□ 0.27
PTPN3P26045 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN3P26045 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN3P26045 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN3P26045 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN3P26045 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN3P26045 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms