Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.17□□□□□ -0.14
CD40P25942 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.17□□□□□ -0.14
CD40P25942 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.17□□□□□ -0.14
CD40P25942 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40P25942 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40P25942 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CD40P25942 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40P25942 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40P25942 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.17□□□□□ -0.14
CD40P25942 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.17□□□□□ -0.14
CD40P25942 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40P25942 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD40P25942 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CD40P25942 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CD40P25942 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40P25942 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.17□□□□□ -0.14
CD40P25942 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.17□□□□□ -0.14
CD40P25942 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 HLA-A-202ENST00000376806 1854 ntBASIC14.16□□□□□ -0.14
CD40P25942 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.16□□□□□ -0.14
CD40P25942 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CD40P25942 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 FLJ16779-201ENST00000612722 7638 ntBASIC14.16□□□□□ -0.14
CD40P25942 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.16□□□□□ -0.14
CD40P25942 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CD40P25942 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 LINC01144-201ENST00000626198 1710 ntBASIC14.16□□□□□ -0.14
CD40P25942 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
CD40P25942 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CD40P25942 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.16□□□□□ -0.14
CD40P25942 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.16□□□□□ -0.14
CD40P25942 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 INGX-202ENST00000489074 768 ntBASIC14.16□□□□□ -0.14
CD40P25942 AC097493.3-201ENST00000509725 367 ntBASIC14.16□□□□□ -0.14
CD40P25942 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.16□□□□□ -0.14
CD40P25942 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.16□□□□□ -0.14
CD40P25942 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.16□□□□□ -0.14
CD40P25942 MIR3197-201ENST00000582241 73 ntBASIC14.16□□□□□ -0.14
CD40P25942 AL390754.1-201ENST00000619088 582 ntBASIC14.16□□□□□ -0.14
CD40P25942 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.16□□□□□ -0.14
CD40P25942 GGT3P-204ENST00000453783 1664 ntBASIC14.16□□□□□ -0.14
CD40P25942 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CD40P25942 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.16□□□□□ -0.14
CD40P25942 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.16□□□□□ -0.14
CD40P25942 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CD40P25942 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CD40P25942 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CD40P25942 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
CD40P25942 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.16□□□□□ -0.14
CD40P25942 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40P25942 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
CD40P25942 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CD40P25942 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.15□□□□□ -0.14
CD40P25942 AL589702.1-201ENST00000641229 1509 ntBASIC14.15□□□□□ -0.14
CD40P25942 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CD40P25942 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CD40P25942 AL035456.1-201ENST00000456064 1369 ntBASIC14.15□□□□□ -0.14
CD40P25942 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.15□□□□□ -0.14
CD40P25942 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.15□□□□□ -0.14
CD40P25942 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.15□□□□□ -0.14
CD40P25942 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.15□□□□□ -0.14
CD40P25942 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.15□□□□□ -0.14
CD40P25942 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.15□□□□□ -0.14
CD40P25942 AC024267.1-201ENST00000582320 895 ntBASIC14.15□□□□□ -0.14
CD40P25942 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.15□□□□□ -0.14
CD40P25942 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.15□□□□□ -0.14
CD40P25942 AJ011932.1-201ENST00000621707 465 ntBASIC14.15□□□□□ -0.14
CD40P25942 AC073592.8-201ENST00000624126 511 ntBASIC14.15□□□□□ -0.14
CD40P25942 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD40P25942 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CD40P25942 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms