Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CCL1P22362 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 AL009183.1-201ENST00000603760 355 ntBASIC14.16□□□□□ -0.14
CCL1P22362 AC010507.1-201ENST00000633895 436 ntBASIC14.16□□□□□ -0.14
CCL1P22362 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL1P22362 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL1P22362 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CCL1P22362 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL1P22362 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL1P22362 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CCL1P22362 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCL1P22362 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL1P22362 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCL1P22362 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL1P22362 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL1P22362 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL1P22362 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CCL1P22362 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CCL1P22362 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL1P22362 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL1P22362 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL1P22362 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCL1P22362 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CCL1P22362 AC016027.1-202ENST00000607927 1699 ntBASIC14.15□□□□□ -0.14
CCL1P22362 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CCL1P22362 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL1P22362 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL1P22362 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL1P22362 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CCL1P22362 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CCL1P22362 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL1P22362 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.15□□□□□ -0.14
CCL1P22362 IGHV3-22-201ENST00000520721 359 ntBASIC14.15□□□□□ -0.14
CCL1P22362 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCL1P22362 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL1P22362 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL1P22362 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL1P22362 AC116407.3-201ENST00000623905 1129 ntBASIC14.15□□□□□ -0.14
CCL1P22362 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL1P22362 CROCCP1-201ENST00000426910 5675 ntBASIC14.15□□□□□ -0.14
CCL1P22362 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL1P22362 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL1P22362 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL1P22362 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL1P22362 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL1P22362 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL1P22362 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL1P22362 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL1P22362 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL1P22362 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL1P22362 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL1P22362 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL1P22362 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL1P22362 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
CCL1P22362 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL1P22362 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CCL1P22362 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CCL1P22362 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CCL1P22362 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL1P22362 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL1P22362 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CCL1P22362 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL1P22362 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL1P22362 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 AC104640.1-201ENST00000562617 2109 ntBASIC14.14□□□□□ -0.15
CCL1P22362 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL1P22362 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.14□□□□□ -0.15
CCL1P22362 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL1P22362 AC092474.2-201ENST00000424288 719 ntBASIC14.14□□□□□ -0.15
CCL1P22362 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.14□□□□□ -0.15
CCL1P22362 KRT18P34-201ENST00000488218 1270 ntBASIC14.14□□□□□ -0.15
CCL1P22362 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL1P22362 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CCL1P22362 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.14□□□□□ -0.15
CCL1P22362 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CCL1P22362 AL078644.1-201ENST00000609881 752 ntBASIC14.14□□□□□ -0.15
CCL1P22362 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms