Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.63■□□□□ 0.25
HLA-DPA1P20036 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 AL662844.4-201ENST00000606367 2838 ntBASIC16.62■□□□□ 0.25
HLA-DPA1P20036 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 AC092364.2-201ENST00000596710 2692 ntBASIC16.62■□□□□ 0.25
HLA-DPA1P20036 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 MCCD1P2-201ENST00000423228 335 ntBASIC16.62■□□□□ 0.25
HLA-DPA1P20036 AC004832.2-201ENST00000426397 482 ntBASIC16.62■□□□□ 0.25
HLA-DPA1P20036 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 PMS2P7-201ENST00000506558 1336 ntBASIC16.62■□□□□ 0.25
HLA-DPA1P20036 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DPA1P20036 AC079328.2-201ENST00000561241 3354 ntBASIC16.61■□□□□ 0.25
HLA-DPA1P20036 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 AC099522.2-201ENST00000607001 744 ntBASIC16.61■□□□□ 0.25
HLA-DPA1P20036 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 AC091812.2-201ENST00000619081 385 ntBASIC16.61■□□□□ 0.25
HLA-DPA1P20036 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DPA1P20036 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms