Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CD58P19256 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD58P19256 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.69■□□□□ 0.42
CD58P19256 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD58P19256 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CD58P19256 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.69■□□□□ 0.42
CD58P19256 KRT18P13-201ENST00000400056 1290 ntBASIC17.69■□□□□ 0.42
CD58P19256 UPF3AP3-201ENST00000420996 769 ntBASIC17.69■□□□□ 0.42
CD58P19256 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.69■□□□□ 0.42
CD58P19256 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.69■□□□□ 0.42
CD58P19256 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.69■□□□□ 0.42
CD58P19256 CEND1P1-201ENST00000451006 455 ntBASIC17.69■□□□□ 0.42
CD58P19256 KRT18P34-201ENST00000488218 1270 ntBASIC17.69■□□□□ 0.42
CD58P19256 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
CD58P19256 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD58P19256 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.69■□□□□ 0.42
CD58P19256 RARRES2P8-201ENST00000566335 367 ntBASIC17.69■□□□□ 0.42
CD58P19256 MIR4469-201ENST00000583919 79 ntBASIC17.69■□□□□ 0.42
CD58P19256 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD58P19256 AC020765.3-201ENST00000613051 740 ntBASIC17.69■□□□□ 0.42
CD58P19256 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.69■□□□□ 0.42
CD58P19256 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
CD58P19256 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD58P19256 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CD58P19256 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD58P19256 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.69■□□□□ 0.42
CD58P19256 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD58P19256 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CD58P19256 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD58P19256 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD58P19256 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.69■□□□□ 0.42
CD58P19256 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.69■□□□□ 0.42
CD58P19256 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CD58P19256 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.69■□□□□ 0.42
CD58P19256 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD58P19256 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD58P19256 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD58P19256 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD58P19256 ME2P1-201ENST00000426028 1970 ntBASIC17.68■□□□□ 0.42
CD58P19256 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD58P19256 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD58P19256 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD58P19256 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD58P19256 MKNK2P1-201ENST00000437526 628 ntBASIC17.68■□□□□ 0.42
CD58P19256 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.68■□□□□ 0.42
CD58P19256 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.68■□□□□ 0.42
CD58P19256 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD58P19256 AL135744.1-201ENST00000565098 629 ntBASIC17.68■□□□□ 0.42
CD58P19256 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD58P19256 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.68■□□□□ 0.42
CD58P19256 AC023511.2-201ENST00000618803 211 ntBASIC17.68■□□□□ 0.42
CD58P19256 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD58P19256 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD58P19256 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD58P19256 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.68■□□□□ 0.42
CD58P19256 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CD58P19256 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD58P19256 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.68■□□□□ 0.42
CD58P19256 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD58P19256 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CD58P19256 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD58P19256 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.67■□□□□ 0.42
CD58P19256 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CD58P19256 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD58P19256 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CD58P19256 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD58P19256 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD58P19256 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD58P19256 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CD58P19256 AC006449.5-201ENST00000610658 2098 ntBASIC17.67■□□□□ 0.42
CD58P19256 ELL2P1-201ENST00000413990 1906 ntBASIC17.67■□□□□ 0.42
CD58P19256 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CD58P19256 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD58P19256 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.67■□□□□ 0.42
CD58P19256 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CD58P19256 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.67■□□□□ 0.42
CD58P19256 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD58P19256 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.67■□□□□ 0.42
CD58P19256 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.67■□□□□ 0.42
CD58P19256 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.67■□□□□ 0.42
CD58P19256 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.67■□□□□ 0.42
CD58P19256 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.67■□□□□ 0.42
CD58P19256 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CD58P19256 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CD58P19256 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD58P19256 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CD58P19256 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.67■□□□□ 0.42
CD58P19256 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.67■□□□□ 0.42
CD58P19256 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CD58P19256 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CD58P19256 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD58P19256 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD58P19256 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.67■□□□□ 0.42
CD58P19256 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD58P19256 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CD58P19256 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD58P19256 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.67■□□□□ 0.42
CD58P19256 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD58P19256 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CD58P19256 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms