Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 GGT3P-204ENST00000453783 1664 ntBASIC18.15■□□□□ 0.5
SMPD1P17405 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMPD1P17405 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.15■□□□□ 0.5
SMPD1P17405 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMPD1P17405 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMPD1P17405 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.15■□□□□ 0.5
SMPD1P17405 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SMPD1P17405 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMPD1P17405 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.15■□□□□ 0.5
SMPD1P17405 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMPD1P17405 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.15■□□□□ 0.5
SMPD1P17405 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SMPD1P17405 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SMPD1P17405 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMPD1P17405 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SMPD1P17405 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.15■□□□□ 0.5
SMPD1P17405 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.15■□□□□ 0.5
SMPD1P17405 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMPD1P17405 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.15■□□□□ 0.5
SMPD1P17405 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMPD1P17405 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.15■□□□□ 0.5
SMPD1P17405 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
SMPD1P17405 KRT17P8-201ENST00000540749 863 ntBASIC18.15■□□□□ 0.5
SMPD1P17405 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
SMPD1P17405 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SMPD1P17405 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
SMPD1P17405 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
SMPD1P17405 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.15■□□□□ 0.5
SMPD1P17405 AC017083.2-201ENST00000608069 979 ntBASIC18.15■□□□□ 0.5
SMPD1P17405 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMPD1P17405 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMPD1P17405 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.15■□□□□ 0.5
SMPD1P17405 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMPD1P17405 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.15■□□□□ 0.5
SMPD1P17405 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.14■□□□□ 0.5
SMPD1P17405 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
SMPD1P17405 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.5
SMPD1P17405 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMPD1P17405 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMPD1P17405 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
SMPD1P17405 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SMPD1P17405 AC105020.1-201ENST00000435356 2205 ntBASIC18.14■□□□□ 0.49
SMPD1P17405 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMPD1P17405 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SMPD1P17405 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.14■□□□□ 0.49
SMPD1P17405 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMPD1P17405 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SMPD1P17405 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMPD1P17405 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMPD1P17405 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMPD1P17405 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.14■□□□□ 0.49
SMPD1P17405 AC106886.1-201ENST00000568660 600 ntBASIC18.14■□□□□ 0.49
SMPD1P17405 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.14■□□□□ 0.49
SMPD1P17405 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.14■□□□□ 0.49
SMPD1P17405 AC074044.1-201ENST00000609673 707 ntBASIC18.14■□□□□ 0.49
SMPD1P17405 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.14■□□□□ 0.49
SMPD1P17405 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.14■□□□□ 0.49
SMPD1P17405 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMPD1P17405 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.14■□□□□ 0.49
SMPD1P17405 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.14■□□□□ 0.49
SMPD1P17405 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMPD1P17405 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMPD1P17405 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
SMPD1P17405 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.14■□□□□ 0.49
SMPD1P17405 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMPD1P17405 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMPD1P17405 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
SMPD1P17405 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
SMPD1P17405 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMPD1P17405 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMPD1P17405 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMPD1P17405 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMPD1P17405 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMPD1P17405 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.14■□□□□ 0.49
SMPD1P17405 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMPD1P17405 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMPD1P17405 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMPD1P17405 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMPD1P17405 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMPD1P17405 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMPD1P17405 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SMPD1P17405 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.13■□□□□ 0.49
SMPD1P17405 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMPD1P17405 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMPD1P17405 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.13■□□□□ 0.49
SMPD1P17405 FO393414.2-201ENST00000405153 598 ntBASIC18.13■□□□□ 0.49
SMPD1P17405 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.13■□□□□ 0.49
SMPD1P17405 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.13■□□□□ 0.49
SMPD1P17405 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
SMPD1P17405 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SMPD1P17405 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.13■□□□□ 0.49
SMPD1P17405 AL365330.1-201ENST00000607459 531 ntBASIC18.13■□□□□ 0.49
SMPD1P17405 AC093726.1-201ENST00000608064 963 ntBASIC18.13■□□□□ 0.49
SMPD1P17405 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.13■□□□□ 0.49
SMPD1P17405 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMPD1P17405 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.13■□□□□ 0.49
SMPD1P17405 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SMPD1P17405 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMPD1P17405 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.13■□□□□ 0.49
SMPD1P17405 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms