Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RARAP10276 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RARAP10276 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.31■□□□□ 0.36
RARAP10276 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RARAP10276 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RARAP10276 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RARAP10276 FDX1P1-201ENST00000449115 551 ntBASIC17.31■□□□□ 0.36
RARAP10276 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.31■□□□□ 0.36
RARAP10276 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.31■□□□□ 0.36
RARAP10276 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
RARAP10276 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RARAP10276 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RARAP10276 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.31■□□□□ 0.36
RARAP10276 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
RARAP10276 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RARAP10276 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RARAP10276 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RARAP10276 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RARAP10276 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RARAP10276 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RARAP10276 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RARAP10276 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.31■□□□□ 0.36
RARAP10276 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARAP10276 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARAP10276 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RARAP10276 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.3■□□□□ 0.36
RARAP10276 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARAP10276 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.3■□□□□ 0.36
RARAP10276 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RARAP10276 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RARAP10276 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
RARAP10276 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RARAP10276 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RARAP10276 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARAP10276 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARAP10276 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARAP10276 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RARAP10276 AC079776.4-201ENST00000511039 504 ntBASIC17.3■□□□□ 0.36
RARAP10276 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.3■□□□□ 0.36
RARAP10276 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.3■□□□□ 0.36
RARAP10276 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RARAP10276 AC145285.3-201ENST00000564603 959 ntBASIC17.3■□□□□ 0.36
RARAP10276 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.3■□□□□ 0.36
RARAP10276 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.3■□□□□ 0.36
RARAP10276 AC010507.1-201ENST00000633895 436 ntBASIC17.3■□□□□ 0.36
RARAP10276 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.3■□□□□ 0.36
RARAP10276 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.3■□□□□ 0.36
RARAP10276 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARAP10276 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RARAP10276 REXO1L8P-201ENST00000604378 1897 ntBASIC17.3■□□□□ 0.36
RARAP10276 PCGF3-213ENST00000620529 1899 ntBASIC17.3■□□□□ 0.36
RARAP10276 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARAP10276 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARAP10276 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RARAP10276 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARAP10276 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARAP10276 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARAP10276 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARAP10276 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARAP10276 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
RARAP10276 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.3■□□□□ 0.36
RARAP10276 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RARAP10276 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RARAP10276 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.29■□□□□ 0.36
RARAP10276 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
RARAP10276 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.29■□□□□ 0.36
RARAP10276 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 RHOQP3-201ENST00000437982 621 ntBASIC17.29■□□□□ 0.36
RARAP10276 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RARAP10276 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RARAP10276 AC096734.2-201ENST00000562054 433 ntBASIC17.29■□□□□ 0.36
RARAP10276 AC034105.1-201ENST00000563488 319 ntBASIC17.29■□□□□ 0.36
RARAP10276 AL031432.2-201ENST00000566714 459 ntBASIC17.29■□□□□ 0.36
RARAP10276 AL928711.1-201ENST00000570165 459 ntBASIC17.29■□□□□ 0.36
RARAP10276 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.29■□□□□ 0.36
RARAP10276 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.29■□□□□ 0.36
RARAP10276 AL645728.2-201ENST00000641974 660 ntBASIC17.29■□□□□ 0.36
RARAP10276 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.29■□□□□ 0.36
RARAP10276 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.29■□□□□ 0.36
RARAP10276 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
RARAP10276 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.29■□□□□ 0.36
RARAP10276 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
RARAP10276 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RARAP10276 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARAP10276 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms