Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RB1P06400 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.28■□□□□ 0.36
RB1P06400 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RB1P06400 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RB1P06400 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.28■□□□□ 0.36
RB1P06400 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RB1P06400 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RB1P06400 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RB1P06400 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.27■□□□□ 0.36
RB1P06400 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.27■□□□□ 0.36
RB1P06400 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RB1P06400 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.27■□□□□ 0.36
RB1P06400 AC068880.1-201ENST00000507289 2297 ntBASIC17.27■□□□□ 0.36
RB1P06400 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RB1P06400 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RB1P06400 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.27■□□□□ 0.36
RB1P06400 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RB1P06400 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.27■□□□□ 0.36
RB1P06400 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RB1P06400 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RB1P06400 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RB1P06400 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RB1P06400 CROCCP4-201ENST00000457096 498 ntBASIC17.27■□□□□ 0.36
RB1P06400 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.27■□□□□ 0.36
RB1P06400 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.27■□□□□ 0.36
RB1P06400 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.27■□□□□ 0.36
RB1P06400 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RB1P06400 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.27■□□□□ 0.36
RB1P06400 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RB1P06400 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.27■□□□□ 0.36
RB1P06400 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RB1P06400 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RB1P06400 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RB1P06400 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RB1P06400 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.27■□□□□ 0.35
RB1P06400 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RB1P06400 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RB1P06400 GPAA1P2-202ENST00000606848 1787 ntBASIC17.27■□□□□ 0.35
RB1P06400 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.27■□□□□ 0.35
RB1P06400 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RB1P06400 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RB1P06400 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.27■□□□□ 0.35
RB1P06400 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RB1P06400 AL391256.1-201ENST00000443260 1855 ntBASIC17.27■□□□□ 0.35
RB1P06400 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RB1P06400 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.26■□□□□ 0.35
RB1P06400 AL133338.1-201ENST00000565695 1517 ntBASIC17.26■□□□□ 0.35
RB1P06400 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RB1P06400 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RB1P06400 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RB1P06400 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.26■□□□□ 0.35
RB1P06400 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RB1P06400 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RB1P06400 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RB1P06400 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RB1P06400 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.26■□□□□ 0.35
RB1P06400 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.26■□□□□ 0.35
RB1P06400 AC092053.1-201ENST00000605787 1936 ntBASIC17.26■□□□□ 0.35
RB1P06400 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RB1P06400 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RB1P06400 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RB1P06400 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RB1P06400 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.26■□□□□ 0.35
RB1P06400 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RB1P06400 ACTBP11-201ENST00000436287 1126 ntBASIC17.26■□□□□ 0.35
RB1P06400 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RB1P06400 BNIP3P42-201ENST00000454982 569 ntBASIC17.26■□□□□ 0.35
RB1P06400 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.26■□□□□ 0.35
RB1P06400 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.26■□□□□ 0.35
RB1P06400 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.26■□□□□ 0.35
RB1P06400 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.26■□□□□ 0.35
RB1P06400 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.26■□□□□ 0.35
RB1P06400 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.26■□□□□ 0.35
RB1P06400 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.26■□□□□ 0.35
RB1P06400 BNIP3P29-201ENST00000598302 571 ntBASIC17.26■□□□□ 0.35
RB1P06400 AC233724.13-201ENST00000598383 410 ntBASIC17.26■□□□□ 0.35
RB1P06400 AC011447.5-201ENST00000616168 564 ntBASIC17.26■□□□□ 0.35
RB1P06400 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RB1P06400 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.26■□□□□ 0.35
RB1P06400 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RB1P06400 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RB1P06400 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RB1P06400 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RB1P06400 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.26■□□□□ 0.35
RB1P06400 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
RB1P06400 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.26■□□□□ 0.35
RB1P06400 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RB1P06400 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RB1P06400 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RB1P06400 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RB1P06400 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.25■□□□□ 0.35
RB1P06400 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RB1P06400 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
RB1P06400 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms