Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB2P05538 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 ELL2P1-201ENST00000413990 1906 ntBASIC16.67■□□□□ 0.26
HLA-DQB2P05538 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 ACTG1P14-201ENST00000446382 1122 ntBASIC16.67■□□□□ 0.26
HLA-DQB2P05538 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 AC243562.1-201ENST00000560672 389 ntBASIC16.67■□□□□ 0.26
HLA-DQB2P05538 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 AC026120.1-201ENST00000611536 926 ntBASIC16.67■□□□□ 0.26
HLA-DQB2P05538 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 U82695.1-201ENST00000635752 1889 ntBASIC16.67■□□□□ 0.26
HLA-DQB2P05538 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DQB2P05538 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 RPSAP43-201ENST00000402237 625 ntBASIC16.66■□□□□ 0.26
HLA-DQB2P05538 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 SPDYE11-202ENST00000450699 704 ntBASIC16.66■□□□□ 0.26
HLA-DQB2P05538 TIMM8BP1-201ENST00000452384 211 ntBASIC16.66■□□□□ 0.26
HLA-DQB2P05538 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 RN7SL589P-201ENST00000481268 310 ntBASIC16.66■□□□□ 0.26
HLA-DQB2P05538 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 FAM86C2P-203ENST00000528684 1004 ntBASIC16.66■□□□□ 0.26
HLA-DQB2P05538 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 AC092865.5-201ENST00000545435 363 ntBASIC16.66■□□□□ 0.26
HLA-DQB2P05538 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 AC005829.1-201ENST00000570002 483 ntBASIC16.66■□□□□ 0.26
HLA-DQB2P05538 SPDYE9P-201ENST00000570642 692 ntBASIC16.66■□□□□ 0.26
HLA-DQB2P05538 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 SPDYE10P-202ENST00000612005 668 ntBASIC16.66■□□□□ 0.26
HLA-DQB2P05538 SPDYE8P-202ENST00000612377 668 ntBASIC16.66■□□□□ 0.26
HLA-DQB2P05538 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms