Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP1A1P05023 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ATP1A1P05023 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.58■□□□□ 0.4
ATP1A1P05023 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
ATP1A1P05023 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ATP1A1P05023 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.58■□□□□ 0.4
ATP1A1P05023 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.58■□□□□ 0.4
ATP1A1P05023 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.58■□□□□ 0.4
ATP1A1P05023 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.58■□□□□ 0.4
ATP1A1P05023 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
ATP1A1P05023 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
ATP1A1P05023 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ATP1A1P05023 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ATP1A1P05023 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
ATP1A1P05023 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ATP1A1P05023 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1A1P05023 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1A1P05023 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1A1P05023 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1A1P05023 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1A1P05023 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1A1P05023 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.57■□□□□ 0.4
ATP1A1P05023 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1A1P05023 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1A1P05023 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP1A1P05023 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1A1P05023 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1A1P05023 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ATP1A1P05023 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1A1P05023 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
ATP1A1P05023 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ATP1A1P05023 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1A1P05023 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
ATP1A1P05023 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.57■□□□□ 0.4
ATP1A1P05023 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP1A1P05023 TPM4P1-201ENST00000436100 807 ntBASIC17.57■□□□□ 0.4
ATP1A1P05023 AC132008.2-207ENST00000454517 770 ntBASIC17.57■□□□□ 0.4
ATP1A1P05023 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.57■□□□□ 0.4
ATP1A1P05023 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.57■□□□□ 0.4
ATP1A1P05023 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
ATP1A1P05023 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.57■□□□□ 0.4
ATP1A1P05023 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP1A1P05023 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.57■□□□□ 0.4
ATP1A1P05023 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1A1P05023 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1A1P05023 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP1A1P05023 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP1A1P05023 LINC01144-201ENST00000626198 1710 ntBASIC17.57■□□□□ 0.4
ATP1A1P05023 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP1A1P05023 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP1A1P05023 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.57■□□□□ 0.4
ATP1A1P05023 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1A1P05023 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1A1P05023 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ATP1A1P05023 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1A1P05023 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP1A1P05023 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1A1P05023 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1A1P05023 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1A1P05023 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1A1P05023 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
ATP1A1P05023 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP1A1P05023 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1A1P05023 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ATP1A1P05023 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP1A1P05023 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1A1P05023 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1A1P05023 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1A1P05023 ABCD1P5-201ENST00000445663 754 ntBASIC17.56■□□□□ 0.4
ATP1A1P05023 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.56■□□□□ 0.4
ATP1A1P05023 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.56■□□□□ 0.4
ATP1A1P05023 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ATP1A1P05023 AC064862.7-201ENST00000604520 867 ntBASIC17.56■□□□□ 0.4
ATP1A1P05023 AC010654.1-201ENST00000615722 808 ntBASIC17.56■□□□□ 0.4
ATP1A1P05023 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP1A1P05023 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1A1P05023 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1A1P05023 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1A1P05023 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1A1P05023 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP1A1P05023 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms