Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
VTNP04004 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
VTNP04004 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.97■□□□□ 0.47
VTNP04004 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.97■□□□□ 0.47
VTNP04004 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VTNP04004 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VTNP04004 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.96■□□□□ 0.47
VTNP04004 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.96■□□□□ 0.47
VTNP04004 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VTNP04004 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VTNP04004 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
VTNP04004 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
VTNP04004 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
VTNP04004 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
VTNP04004 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VTNP04004 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
VTNP04004 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
VTNP04004 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.96■□□□□ 0.47
VTNP04004 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VTNP04004 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.96■□□□□ 0.47
VTNP04004 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VTNP04004 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VTNP04004 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VTNP04004 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VTNP04004 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VTNP04004 AC009477.1-201ENST00000452936 217 ntBASIC17.96■□□□□ 0.47
VTNP04004 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.96■□□□□ 0.47
VTNP04004 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.96■□□□□ 0.47
VTNP04004 AC009407.1-201ENST00000568958 598 ntBASIC17.96■□□□□ 0.47
VTNP04004 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.96■□□□□ 0.47
VTNP04004 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
VTNP04004 AC092171.3-201ENST00000610122 2651 ntBASIC17.96■□□□□ 0.47
VTNP04004 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VTNP04004 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VTNP04004 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VTNP04004 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.96■□□□□ 0.47
VTNP04004 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VTNP04004 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VTNP04004 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
VTNP04004 AC087499.5-201ENST00000452760 1342 ntBASIC17.96■□□□□ 0.46
VTNP04004 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.95■□□□□ 0.46
VTNP04004 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VTNP04004 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.95■□□□□ 0.46
VTNP04004 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VTNP04004 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VTNP04004 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VTNP04004 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
VTNP04004 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.95■□□□□ 0.46
VTNP04004 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VTNP04004 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VTNP04004 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
VTNP04004 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VTNP04004 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.95■□□□□ 0.46
VTNP04004 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.95■□□□□ 0.46
VTNP04004 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VTNP04004 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VTNP04004 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.95■□□□□ 0.46
VTNP04004 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VTNP04004 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.95■□□□□ 0.46
VTNP04004 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.95■□□□□ 0.46
VTNP04004 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.95■□□□□ 0.46
VTNP04004 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.95■□□□□ 0.46
VTNP04004 AC008738.7-201ENST00000609744 511 ntBASIC17.95■□□□□ 0.46
VTNP04004 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.95■□□□□ 0.46
VTNP04004 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.95■□□□□ 0.46
VTNP04004 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VTNP04004 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VTNP04004 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VTNP04004 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.95■□□□□ 0.46
VTNP04004 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
VTNP04004 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VTNP04004 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
VTNP04004 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.94■□□□□ 0.46
VTNP04004 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.94■□□□□ 0.46
VTNP04004 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
VTNP04004 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.94■□□□□ 0.46
VTNP04004 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.94■□□□□ 0.46
VTNP04004 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.94■□□□□ 0.46
VTNP04004 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.94■□□□□ 0.46
VTNP04004 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.94■□□□□ 0.46
VTNP04004 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
VTNP04004 AF228730.6-201ENST00000641497 218 ntBASIC17.94■□□□□ 0.46
VTNP04004 AC084121.3-201ENST00000641716 218 ntBASIC17.94■□□□□ 0.46
VTNP04004 AC105233.6-201ENST00000642093 218 ntBASIC17.94■□□□□ 0.46
VTNP04004 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.94■□□□□ 0.46
VTNP04004 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.94■□□□□ 0.46
VTNP04004 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.94■□□□□ 0.46
VTNP04004 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms